DN618289

Overview
NameDN618289
Unique NameDN618289
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length618
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22A6_DANRE (Solute carrier family 22 member 6 OS=Danio rerio GN=slc22a6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.365e-21
Identity = 50/141 (35.46%), Postives = 87/141 (61.70%), Query Frame = -2
Query:  192 EMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG---WLPFAVFAACGIIGGLFAFYLPETLNKPLYDTM 605
            ++PA  I  + +  LGR+P   G L  +G   L+  LV ++   +++R    V+G   +A ++N  ++Y  EL+PTV+R + +G  +  A+ GA++AP V++LG    W+P  ++    I+ G+FAF+LPETL++PL DT+
Sbjct:  386 DIPAKIIVTICMSMLGRRPSQCGALVLAGIMILINLLVPSD--LQMLRTSLAVIGKGCLAASFNCCYLYAGELYPTVIRQSGMGWVSMMARFGAMVAPMVLLLGDDYPWIPGFIYGGAPIVSGIFAFFLPETLSQPLPDTI 524          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22FL_XENLA (Solute carrier family 22 member 15-like OS=Xenopus laevis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.007e-21
Identity = 53/149 (35.57%), Postives = 83/149 (55.70%), Query Frame = -2
Query:  180 VAEMPAFTITAVLLDKL--GRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGGW---LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 611
            + E+PAF +    ++K   GR+  T G L F+GF C+    V       I   +  + G   V+  +N+++IYT+EL+PTVVRNA LG    A + G IL+PF+  +  +   +PF  F   GI  G+ +  LPET NKP+ +T+  ++
Sbjct:  322 LVEVPAFPLCLYFIEKSWSGRRRATAGFLVFAGFACIFTIFVPETNGDFINPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPAMKSFNPSMPFVAFGISGISAGILSLLLPETRNKPIAETIEDLQ 470          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: ORCT_DROME (Organic cation transporter protein OS=Drosophila melanogaster GN=Orct PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.663e-20
Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = -2
Query:  192 NAVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG-W--LPFAVFAACGIIGGLFAFYLPETLNKPLYDTM 617
            +   E+P +T+    L++ GR+ +  GT+  +G   L    V ++  W IV   C ++G   +  +Y  ++I++ E FPTVVRN  LG ++  A++G ILAP++ +LG  W  LP  +  A  +  GL +  LPETLNKP+ +T+
Sbjct:  373 SGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVA--CAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIICGALSLTAGLLSLLLPETLNKPMPETI 515          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22AF_XENLA (Solute carrier family 22 member 15 OS=Xenopus laevis GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.542e-20
Identity = 53/155 (34.19%), Postives = 94/155 (60.65%), Query Frame = -2
Query:  180 NAVAEMPAFTITAVLLD--KLGRKPMTIGTLWFSGFFCLLGSLV---KNNGIWKIVR-MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG--W-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 617
            + +AE+PA+ +   L++  ++GR+    G L+  G  CLL  LV   + +G   ++      ++G   ++ ++N+++IY++EL+PT VRN  +G  +  +++G I+APF+  L    W LPF VF A G+  GL + +LPETLN PL +T+  ++
Sbjct:  332 SGLAELPAYPLCMYLINHKRVGRRRSLAGFLFLGGGSCLLIMLVPVKEGSGPLSVLNSQTLSLLGKLNISASFNIVYIYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRSVHWALPFIVFGAAGVSAGLLSLFLPETLNVPLPETLGDLQ 486          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22FL_XENTR (Solute carrier family 22 member 15-like OS=Xenopus tropicalis GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.932e-20
Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = -2
Query:  180 VAEMPAFTITAVLLDKL--GRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVV---LGGWLPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 611
            + E+PAF +    ++K   GR+  T G L F+GF C+    +       +   +  + G   V+  +N+++IYT+EL+PTVVRNA LG    A + G IL+PF+     L   +PF  F   GI  G+ +  LPET NKP+ +++  ++
Sbjct:  322 LVEVPAFPLCLYFIEKSWSGRRKATAGFLGFAGFACIFTIFLPETNGDLLNPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPFIPTMKSLNPSMPFVAFGISGISAGILSLLLPETRNKPIAESIEDLQ 470          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22AF_MOUSE (Solute carrier family 22 member 15 OS=Mus musculus GN=Slc22a15 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.726e-19
Identity = 53/155 (34.19%), Postives = 90/155 (58.06%), Query Frame = -2
Query:  180 NAVAEMPAFTITAVLLDK--LGRKPMTIGTLWFSGFFCLLGSLV---KNNGIWKIVRM-ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGG--W-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 617
            + + E+P++ +   L+++   GRK      L   G  CL+   +   K+ G++ +V      ++G   ++  +N+++IYT+EL+PTV+RN  LG  +  +++G I+APFV  L    W LPF VF A G+  GL +  LPETLN PL +T + ++
Sbjct:  343 SGLIEIPSYPLCIYLINQRWFGRKRTLAAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGACSMFSRVGGIIAPFVPSLKDVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQ 497          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22AF_HUMAN (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.021e-19
Identity = 52/155 (33.55%), Postives = 90/155 (58.06%), Query Frame = -2
Query:  180 NAVAEMPAFTITAVLLDK--LGRKPMTIGTLWFSGFFCLLGSLV---KNNGIWKIVRM-ICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLG--GW-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 617
            + + E+P++ +   L+++   GRK      L   G  CL+   +   K+ G++ +V      ++G   ++  +N+++IYT+EL+PTV+RN  LG  +  +++G I+APF+  L    W LPF VF A G+  GL +  LPETLN PL +T + ++
Sbjct:  343 SGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDLQ 497          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22AF_XENTR (Solute carrier family 22 member 15 OS=Xenopus tropicalis GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.558e-19
Identity = 53/155 (34.19%), Postives = 91/155 (58.71%), Query Frame = -2
Query:  180 NAVAEMPAFTITAVLLD--KLGRKPMTIGTLWFSGFFCLLGSLVKN---NGIWKIVR-MICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVL--GGW-LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMK 617
            + +AE+PA+ +   L++  ++GR+    G L   G  CLL  LV     +G   ++      ++G   ++  +N+++IY++EL+PT VRN  +G  +  +++G I+APF+  L    W LPF VF A G+  GL +  LPETL+ PL +T+A ++
Sbjct:  332 SGLAELPAYPLCMYLINHKRVGRRGSLAGFLCVGGGACLLIMLVPGKTGSGPLSVLNSQTLSLLGKLNISAAFNIVYIYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRFAHWALPFIVFGAAGVSAGLLSLLLPETLSAPLPETLADLR 486          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22AC_HUMAN (Solute carrier family 22 member 12 OS=Homo sapiens GN=SLC22A12 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.908e-18
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = -2
Query:  192 VAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVL---GGWLPFAVFAACGIIGGLFAFYLPETLNKPLYDTM 611
            V ++PA     +LL  LGR+P    +L  +G   L  +LV +      +R    V+G+ GV   +  + IY++ELFPTV+R  A+G    AA+ GAIL P V +L   G WLP  V+    ++ GL A  LPET + PL DT+
Sbjct:  387 VVDIPAKMGALLLLSHLGRRPTLAASLLLAGLCILANTLVPHE--MGALRSALAVLGLGGVGAAFTCITIYSSELFPTVLRMTAVGLGQMAARGGAILGPLVRLLGVHGPWLPLLVYGTVPVLSGLAALLLPETQSLPLPDTI 527          
BLAST of DN618289 vs. ExPASy Swiss-Prot
Match: S22A5_RAT (Solute carrier family 22 member 5 OS=Rattus norvegicus GN=Slc22a5 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18
Identity = 48/153 (31.37%), Postives = 86/153 (56.21%), Query Frame = -2
Query:  165 AVAEMPAFTITAVLLDKLGRKPMTIGTLWFSGFFCLLGSLVKNNGIWKIVRMICGVMGIFGVAGTYNLLFIYTTELFPTVVRNAALGCATQAAQLGAILAPFVVVLGGW---LPFAVFAACGIIGGLFAFYLPETLNKPLYDTMAGMKEGEGV 614
            A  E+PA+ +  +LL  L R+      L+  G   L   LV +   +    ++  ++G FG+   Y+++++YT EL+PTVVRN  +G ++ A++LG+IL+P+ V LG +   LP+ +  +  I+  +   + PE+   PL DT+  M   +G+
Sbjct:  380 AAVEVPAYVLAWLLLQHLPRRYSISAALFLGGSVLLFIQLVPSELFYLSTALV--MVGKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLTILTAILTLFFPESFGAPLPDTIDQMLRVKGI 530          
The following BLAST results are available for this feature:
BLAST of DN618289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
S22A6_DANRE5.365e-2135.46Solute carrier family 22 member 6 OS=Danio rerio G... [more]
S22FL_XENLA7.007e-2135.57Solute carrier family 22 member 15-like OS=Xenopus... [more]
ORCT_DROME2.663e-2035.17Organic cation transporter protein OS=Drosophila m... [more]
S22AF_XENLA4.542e-2034.19Solute carrier family 22 member 15 OS=Xenopus laev... [more]
S22FL_XENTR5.932e-2034.23Solute carrier family 22 member 15-like OS=Xenopus... [more]
S22AF_MOUSE1.726e-1934.19Solute carrier family 22 member 15 OS=Mus musculus... [more]
S22AF_HUMAN5.021e-1933.55Solute carrier family 22 member 15 OS=Homo sapiens... [more]
S22AF_XENTR6.558e-1934.19Solute carrier family 22 member 15 OS=Xenopus trop... [more]
S22AC_HUMAN1.908e-1838.46Solute carrier family 22 member 12 OS=Homo sapiens... [more]
S22A5_RAT3.255e-1831.37Solute carrier family 22 member 5 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02F20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618289 ID=DN618289; Name=DN618289; organism=Citrus sinensis; type=EST; length=618bp
TTTTTTTTTGACACCCTCAACATTCATTTACCTCCATTCACTGGTAAATT
CTAGGTGAAATTCAAATTCAACAGCAGAAGGTGATTAAAATAGAGAAAAA
GAATTCATCAACAATGATTCTCTTCAACCCTTGCCTGAAGATAAACGCGG
TTAAGAGTCTAAACAACACCTTCTCCTTCTTTCATTCCGGCCATTGTGTC
ATACAACGGCTTGTTTAATGTCTCCGGTAGGTAAAATGCAAACAGCCCTC
CGATAATGCCACATGCTGCAAACACTGCAAATGGCAACCAACCACCCAAA
ACCACCACGAATGGTGCCAAAATCGCCCCCAGTTGGGCGGCCTGTGTTGC
ACACCCGAGGGCTGCGTTTCTCACTACTGTAGGGAACAACTCTGTAGTGT
ATATAAATAGCAAATTGTAAGTACCAGCCACCCCAAAGATACCCATAACG
CCACAAATCATCCTCACAATTTTCCATATGCCATTGTTTTTAACTAAACT
ACCAAGTAAGCAGAAAAATCCACTAAACCAAAGAGTGCCTATTGTCATCG
GTTTCCTTCCGAGTTTGTCCAACAAAACTGCTGTGATTGTGAATGCTGGC
ATCTCTGCTACTGCATTG
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