DN618283

Overview
NameDN618283
Unique NameDN618283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 5.968e-40
Identity = 72/115 (62.61%), Postives = 96/115 (83.48%), Query Frame = -2
Query:  174 GLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 518
            G VEQWL+VEA +Y+P +  LT+ ++F+   G P DEK++KES+EKL + LDVYE +LSK++YLAGDF SLADL+H+PFT YLVGP+G+ H+I+DRKHVSAWWD IS+R +WK+V
Sbjct:   93 GQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 207          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.830e-24
Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  165 LVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLEL 515
            +V+QW+EVE + +      L + ++F  K G+P D  LV+E   K  K LDVYE RL+ ++YL GD F+LADLSH+P   Y++       ++  R++++ WW++IS RP+WKK++EL
Sbjct:   95 IVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 52/116 (44.83%), Postives = 72/116 (62.07%), Query Frame = -2
Query:  168 LVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 515
            ++  W+EVE+  ++P   +LT +++     G   D+  V E++EKLGK LDVYE RL  SKYL GD F+LADL H P  +YL+G   +  +   R HVSAW  DI  RP+W K +E
Sbjct:   95 IMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCADILARPAWSKAIE 209          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23
Identity = 58/122 (47.54%), Postives = 77/122 (63.11%), Query Frame = -2
Query:  153 LVEQWLEVEAHNYNPAIYELTIQLLFSSK-FGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCKTP 515
            +V+ WLEVE++ Y PA+  +  Q L     FG P DEK+V+E+ EKL K L+VYE RL+K KYLAGD+ S+ADLSH+  T   +G      ++    HV AWW D+  RPS +KV  L K P
Sbjct:   94 MVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGT-VCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMKPP 214          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22
Identity = 54/116 (46.55%), Postives = 74/116 (63.79%), Query Frame = -2
Query:  159 WLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 503
            W EVEAH ++P   +L  +L+F   FG   D  +V+E++ KL K LDVYE RL++S+YL A D F+L DL H+P   YL+G   ++ +  +R HVSAW   I  RPSW+K L L K
Sbjct:  101 WEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.250e-21
Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = -2
Query:  174 LVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKV 515
            +V+ W EVE H YN AI  +  + + +    G P ++K+V ES EKL K L+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +     HV AWW+ +  RPS KK+
Sbjct:   97 MVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWERLMARPSVKKL 210          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.132e-21
Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = -2
Query:  159 WLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 503
            WL+VE   ++P   +L  + +F   FG   D   V+E + KL K LDVYE RL+KS++LAGD F+LADL H+P  HYL+G   +  +   R  VS W   IS RP+W KV++L K
Sbjct:  149 WLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 4.750e-21
Identity = 54/119 (45.38%), Postives = 72/119 (60.50%), Query Frame = -2
Query:  159 LVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLELCK 515
            +V+ W+EVEA+ Y  A+  +  Q+L S   G   D+K+V E+ EKL K L+VYE RL+K KYLAGDF SLADL+H+  T  L        ++    HV AWW  +  RPS +KV  L K
Sbjct:   94 MVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFA-TPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.528e-19
Identity = 50/116 (43.10%), Postives = 69/116 (59.48%), Query Frame = -2
Query:  168 LVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVLE 515
            ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  DI  RP+W K LE
Sbjct:   95 IMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCADILARPAWVKGLE 209          
BLAST of DN618283 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.996e-19
Identity = 48/115 (41.74%), Postives = 73/115 (63.48%), Query Frame = -2
Query:  171 LVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDDISNRPSWKKVL 515
            ++   +E+E+H ++P   +L  + +    +G   D+ +V+E + KL K LDVYE RL +SKYLA D F+L DL  IP   YL+G   ++ +  +R HVSAW  DI++RPS +KVL
Sbjct:   95 IIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKK-LFDERPHVSAWVADITSRPSAQKVL 208          
The following BLAST results are available for this feature:
BLAST of DN618283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF3_ARATH5.968e-4062.61Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH7.830e-2441.88Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF_HYOMU2.278e-2344.83Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF2_ORYSJ2.278e-2347.54Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF_SILCU5.611e-2246.55Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF1_ORYSJ1.250e-2146.09Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF6_ARATH2.132e-2145.22Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_MAIZE4.750e-2145.38Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_TOBAC1.528e-1943.10Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_ARATH1.996e-1941.74Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02F17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618283 ID=DN618283; Name=DN618283; organism=Citrus sinensis; type=EST; length=666bp
TTTTTTTTTAAAAACAAAAGGTCCAACTCCAAACATTTATTTATTGAAAC
ACATATGCAAGATACATATCCCACAGACAGAAACAAACCAAGTAGTAGAG
AAGTAAAACACAAGCCCGAAAATTGAAACACATACAATCAAGCTCAGCCG
AAAGGAGTCTTACAAAGTTCAAGGACTTTCTTCCAGGACGGCCTGTTGCT
AATATCATCCCACCAAGCACTCACATGCTTCCTGTCTCTAATCATATGCT
GTCTCCCCATCGGCCCAACCAAGTAGTGGGTAAATGGAATGTGACTCAGA
TCAGCCAGGCTGAAGAAATCACCAGCCAAATACTTGCTCTTTGAGAGCCT
CTCCTCGTAAACGTCGAGCGTTTTTCCAAGCTTTTCGTCACTCTCCTTCA
CCAATTTTTCATCAACGGGACGTCCAAACTTGGAAGAAAATAAAAGTTGG
ATGGTCAGCTCGTAAATTGCTGGGTTGTAGTTGTGTGCCTCTACTTCTAG
CCACTGTTCCACCAGGCCTCTTTCTTTTTTTTTTGTTTCAAGTCTTTACT
TTTATAAAATCCAAAATGAGCAAACAAGGCCTATAGGCAACCATCTGATG
GAATTATTAATATTAGAAAATGGTGCAACTGATCGGCTGCTGCTAGGAAC
AAACCACAGCTCGACC
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