DN618281

Overview
NameDN618281
Unique NameDN618281
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618281 vs. ExPASy Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.378e-38
Identity = 80/215 (37.21%), Postives = 127/215 (59.07%), Query Frame = 1 
Query:    1 VILQEEPFKSTTVRSIIKSYRWAPFLPVATDDXXXXXXXXXXKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFRQLTVRDFMNAVVPTTPDSGKVIPP-----ITCQLESTLGSVIHSLASKSVHRIYVV 630
            V+   E +K+T VR I  ++RWAPFL +  ++          KY+++++P+++ G   I+N ITQS V+  L  C G  WF+    + +S++GLP MS D +I I  +E +L+AFK M+   IGGIPV+E   +K VGN+S+RD++ LL  PE++ ++R +T ++F+ +V       G    P     I C    TL  +I  L ++ +HRIYVV
Sbjct:  167 VLTSSELYKNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGVAKIENIITQSGVIHMLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFLVSVREHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVV 381
The following BLAST results are available for this feature:
BLAST of DN618281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KING1_ARATH2.378e-3837.21SNF1-related protein kinase regulatory subunit gam... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02F16_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618281 ID=DN618281; Name=DN618281; organism=Citrus sinensis; type=EST; length=644bp
GTTATCCTTCAAGAAGAACCTTTCAAGTCGACTACAGTGAGGTCAATAAT
TAAGTCCTATCGCTGGGCACCTTTCCTTCCAGTTGCAACAGATGATTCTA
TGCTGAGCGTCTTACTGCTGCTCTCAAAATATAGGTTGAGAAACGTACCT
ATCATTGAACCAGGCACGCCTGATATTAAGAACTACATTACTCAATCAGC
AGTTGTTCAGGGTCTGGAAGGATGCAAAGGAAGGGACTGGTTTGACATTA
TTGCTTCACAACCTATTTCTGATCTAGGGCTTCCGTTCATGTCTTCTGAT
GAGGTTATTACCATACAGAGCAATGAACTGATTCTGGAAGCTTTCAAACG
GATGAAAGATAACAATATTGGTGGCATTCCAGTCGTAGAGGGACAACAAA
AGAAAATTGTGGGAAATGTAAGCATAAGAGATATCAGACACTTGCTGCTC
AAACCAGAACTCTTCTCCAATTTCAGGCAGCTTACGGTCAGAGATTTCAT
GAATGCTGTGGTACCAACCACCCCAGATTCTGGGAAAGTCATCCCACCAA
TAACATGCCAGCTGGAGTCAACTCTCGGTAGTGTGATCCACAGTCTTGCT
TCCAAGTCTGTTCACAGAATCTATGTGGTAGCTGGCGAGGGAGC
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