DN618279

Overview
NameDN618279
Unique NameDN618279
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.013e-37
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = -1
Query:  411 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 644
            RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD
Sbjct:  278 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 355          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.160e-35
Identity = 72/78 (92.31%), Postives = 76/78 (97.44%), Query Frame = -1
Query:  411 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 644
            RLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG PNALDG+YVGG+HPELILAAADSAE AD
Sbjct:  274 RLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELILAAADSAEIAD 351          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.802e-31
Identity = 67/78 (85.90%), Postives = 71/78 (91.03%), Query Frame = -1
Query:  411 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 644
            RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA  LALK+LG PNA+DGT VG + PEL+LAAADSAET D
Sbjct:  271 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVLAAADSAETVD 348          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.768e-25
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = -1
Query:  429 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAAD 644
            RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT    +  EL++A  D
Sbjct:  277 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMIAYKD 348          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = -1
Query:  429 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHP----ELILAAAD 644
            RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT +  V P    E ++A+ D
Sbjct:  274 RLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGT-IPEVSPALREEFVIASKD 348          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.716e-12
Identity = 33/58 (56.90%), Postives = 47/58 (81.03%), Query Frame = -1
Query:  465 TREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVG 638
            TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL+SL +    +G  VG
Sbjct:  278 TREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEGEVVG 335          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.236e-11
Identity = 32/44 (72.73%), Postives = 39/44 (88.64%), Query Frame = -1
Query:  507 TREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 638
            TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA  ALK
Sbjct:  270 TREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALK 313          
BLAST of DN618279 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = -1
Query:  507 TREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 638
            TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA  ALK
Sbjct:  266 TREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309          
The following BLAST results are available for this feature:
BLAST of DN618279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
THI4_CITSI2.013e-37100.00Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL7.160e-3592.31Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH4.802e-3185.90Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE1.768e-2580.56Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE2.552e-2477.63Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI4_UROFA1.716e-1256.90Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]
THI4_FUSSH3.236e-1172.73Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSOX5.520e-1172.73Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02F15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618279 ID=DN618279; Name=DN618279; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTAGCAACAAAAACAGAGTAAGCTCAGATCTTCATCATTGATCT
TAATCACATCAGCACTGTCCCATTGGCTGATGCCTCAAGTTATAAACATA
CAAAGCAAAGAAAAGGGAACAGCCCAAGGGCAGTCTTACACATAATACAG
ATAACAAGGACTAGATACGCAACTGCAAATTCACCCCCGAAAAACTCACA
ACGGTTTCTTACAAGAGGAGAAAGAAATTAAAATTAAAGGTTGCATGATG
GACCGGAAACAAACACTTTATTCACAAAACCTCACAACATCATCTCATTA
TTCGCATCAACCATCCATCACAACCACCTAAATACAACTACTTTTTTGCC
AGAGTTTATTTGCATGCACACAGCTGATGAGTGATGATGCCTGTTATTAT
CAAATTAACCATCAGCAGTCTCAGCAGAATCAGCTGCAGCTAAGATCAGC
TCAGGGTGAACACCTCCCACATATGTACCGTCTAATGCATTCGGCTGGCC
CAGTGACTTCAACGCCAAATGCGCAGCCTTCTGCCCCGATATCATCATTG
CTCCAAATGTTGGCCCCATTCTAGGAGCACCATCAATCTCGGCAACTTCC
ATGCCGGTAACTATCATACCAGGCACAACCTCCCTGGTCAGCCT
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