DN618274

Overview
NameDN618274
Unique NameDN618274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618274 vs. ExPASy Swiss-Prot
Match: CRTZ_ESCVU (Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.566e-20
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = -3
Query:  212 ARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHS 538
            A + H+ + H   W  HESHH PR+G FELND+FA++ A  AIAL++ G    G+ P    G G+  TV+G+ Y  VHDGLVH+R+P   I    Y +R+  AH+LHH+
Sbjct:   19 AAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVG--TAGVWPLQWIGCGM--TVYGLLYFLVHDGLVHQRWPFHWIPRRGYLKRLYVAHRLHHA 123          
BLAST of DN618274 vs. ExPASy Swiss-Prot
Match: CRTZ_PANAN (Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=4 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.274e-18
Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = -3
Query:  212 ARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHS 538
            A  AHK + H   W  H SHH PR+G FE+ND++A++ A  +I L+  G    G+ P    GAG+  T +G+ Y  VHDGLVH+R+P   I    Y +R+  AH++HH+
Sbjct:   21 AALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG--STGMWPLQWIGAGM--TAYGLLYFMVHDGLVHQRWPFRYIPRKGYLKRLYMAHRMHHA 125          
BLAST of DN618274 vs. ExPASy Swiss-Prot
Match: CRTZ_PARS1 (Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.853e-15
Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = -3
Query:  185 HKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHS--DKFHGVPYG 526
            H+ + H  L W  H+SHH   +   E ND++ ++ AV A  L + G +   ++    +   LG+TV+G+ Y  +HDGLVH+R+P   I    YFRR+  AH+LHH+   + H V +G
Sbjct:   22 HRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGVVFAVLATILFTVGAYWWPVL----WWIALGMTVYGLIYFILHDGLVHQRWPFRYIPRRGYFRRLYQAHRLHHAVEGRDHCVSFG 134          
BLAST of DN618274 vs. ExPASy Swiss-Prot
Match: CRTZ_PARSN (Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC 01143) GN=crtZ PE=4 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.890e-14
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = -3
Query:  185 HKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIADVPYFRRVAAAHQLHHS--DKFHGVPYG 526
            H+ + H  L W  H+SHH   +   E ND++ ++ AV A  L + G+    ++    +   LG+TV+G+ Y  +HDGLVH+R+P   I    Y RR+  AH+LHH+   + H V +G
Sbjct:   22 HRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGLVFAVIATVLFTVGWIWAPVL----WWIALGMTVYGLIYFVLHDGLVHQRWPFRYIPRKGYARRLYQAHRLHHAVEGRDHCVSFG 134          
The following BLAST results are available for this feature:
BLAST of DN618274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CRTZ_ESCVU4.566e-2045.87Beta-carotene hydroxylase OS=Escherichia vulneris ... [more]
CRTZ_PANAN4.274e-1842.20Beta-carotene hydroxylase OS=Pantoea ananas GN=crt... [more]
CRTZ_PARS19.853e-1536.75Beta-carotene hydroxylase OS=Paracoccus sp. (strai... [more]
CRTZ_PARSN4.890e-1435.90Beta-carotene hydroxylase OS=Paracoccus sp. (strai... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02F13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618274 ID=DN618274; Name=DN618274; organism=Citrus sinensis; type=EST; length=546bp
ATTTATTTTTTTTCATTAATAACACTATTGGTTTCTGTACACTGACAAAT
TGATCCAAAAATTGGTCCTCCCATTAAATTGATTATTTTGGAACCCTGTT
GTATGATTTGATTCTCTTACTGATCTCCTTCTCCAATTCTTCTAGTCCCC
CCACTTCTTCAAGCTCCTTAGGTCCGAGAAAGAGCCCATATGGAACACCG
TGGAATTTATCCGAGTGGTGAAGCTGGTGAGCCGCAGCGACTCTCCGGAA
ATAAGGCACGTCGGCAATGGGACCCACAGGGAACCTTTTGTGAACGAGAC
CATCGTGGACGAACATGTAGGCCATCCCAAACACCGTAATGCCAAGTCCA
GCACCAAAACAGAGACCAGGTACAAGGCCTTTGTGGAAGAAGCCAAAAGA
GAGAAGGGCTATGGCTGGAACTGCGTTGATTATGGCAAACACATCGTTTA
GCTCAAAAGGACCCTCTCTTGGTCGATGGTGAGACTCGTGCATATGCCAT
AAAGAAGCATGCCACAGAGCTTTATGAGCCCATCGTGCCCAAAACT
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