DN618270
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 3.846e-72 Identity = 130/134 (97.01%), Postives = 131/134 (97.76%), Query Frame = -2 Query: 205 PDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLEDKDMAFTASPGTKG 606 PDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAR+HIKDMMRQMWKKVNAYTADKDSPLT TT EFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLEDK MAFTASPGTKG Sbjct: 473 PDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVARQHIKDMMRQMWKKVNAYTADKDSPLTGTTTEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLEDKHMAFTASPGTKG 606
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.747e-32 Identity = 70/119 (58.82%), Postives = 87/119 (73.11%), Query Frame = -2 Query: 250 PDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPL 606 P+I+ WSS I RL DDLGTS+DE++RGDVPK+IQCYM+ETGASEE ARE+IK ++ WKK+N A SP + E LNL RM+ +Y HGDGHG+ N+ET D +LL QPIPL Sbjct: 477 PNIIRWSSIIARLADDLGTSTDELKRGDVPKAIQCYMNETGASEEGAREYIKYLISATWKKMNKDRA-ASSPFSHIFIEIALNLARMAQCLYQHGDGHGLGNRETKDRILSLLIQPIPL 594
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: SSS_SALOF ((+)-sabinene synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.443e-26 Identity = 58/115 (50.43%), Postives = 75/115 (65.22%), Query Frame = -2 Query: 259 DIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQP 603 +I++ S I RL DDLGTS E++RGDVPK+IQCYM++T ASE A EH+K ++R+ WK++N T D P T NL R + F+YL GDGHGVQ+ E LLFQP Sbjct: 474 NILYLSGTILRLADDLGTSQHELERGDVPKAIQCYMNDTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDDLVAAAANLARAAQFIYLDGDGHGVQHSEIHQQMGGLLFQP 588
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.191e-26 Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = -2 Query: 250 PDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPL 606 P+IV +S I RL DDLGT SDE++RGDVPKSIQCYMH+TGASE+ AREHIK ++ + WK++N + +S + + NL R S F+Y +GDGH QN + + L+ PIP+ Sbjct: 504 PNIVRHASIILRLADDLGTLSDELKRGDVPKSIQCYMHDTGASEDEAREHIKYLISESWKEMNNEDGNINSFFSNEFVQVCQNLGRASQFIYQYGDGHASQNNLSKERVLGLIITPIPM 622
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.701e-25 Identity = 62/123 (50.41%), Postives = 81/123 (65.85%), Query Frame = -2 Query: 247 DIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVN--AYTADKDSP-LTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQ-ETIDVGFTLLFQPIPLE 603 D+V S+ + RL +DL TS DE+ RGDV KS+QCYMHETG SEE AR H++ M+ W ++N A TA + S L+R E +NL RMS MY HGDGHG ++ + +D TLL PIPL+ Sbjct: 476 DVVRCSATVLRLANDLATSPDELARGDVLKSVQCYMHETGVSEEEARTHVQQMISHTWDEMNYEARTAARSSSLLSRRFVETAMNLARMSQCMYQHGDGHGCPDKAKIVDRVQTLLVDPIPLD 598
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.017e-25 Identity = 62/121 (51.24%), Postives = 79/121 (65.29%), Query Frame = -2 Query: 247 IVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNA--YTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGV-QNQETIDVGFTLLFQPIPLE 600 IV S+ + RL +DLGTS E+ RGDV KS+QCYMHETGASEE AR+H+ M+ MW +N+ TA S +R E +NL RMS MY +GDGHG + +TID +LL PIPL+ Sbjct: 475 IVRCSATVLRLANDLGTSPTELARGDVLKSVQCYMHETGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCPEKAKTIDRVQSLLVDPIPLD 595
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.026e-24 Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = -2 Query: 250 SKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFL---LNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPL 585 S + RL DDLGT SDE++RGDVPKSIQCYMH+TGASE+ AREHIK ++ ++WK++N D+D + + EF+ NL RMS FMY HGDGH Q+ + L+ PIPL Sbjct: 505 SLMLRLADDLGTLSDEMKRGDVPKSIQCYMHDTGASEDEAREHIKFLISEIWKEMN----DEDEYNSIFSKEFVQACKNLGRMSLFMYQHGDGHASQDSHSRKRISDLIINPIPL 615
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: MYRS1_ARATH (Myrcene/ocimene synthase 1, chloroplastic OS=Arabidopsis thaliana GN=TPS10 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.287e-24 Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = -2 Query: 247 DIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVN-AYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHG-VQNQETIDVGFTLLFQPIPLE 603 ++V SS +FRL +DL TS DE+ RGDV KSIQCYM ETGASE+ AR H++ M+ +W ++N A S L E ++NL RMS MY +GDGHG + + +D +LLF PIPL+ Sbjct: 471 NVVRCSSSVFRLANDLVTSPDELARGDVCKSIQCYMSETGASEDKARSHVRQMINDLWDEMNYEKMAHSSSILHHDFMETVINLARMSQCMYQYGDGHGSPEKAKIVDRVMSLLFNPIPLD 591
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: BPPS_SALOF ((+)-bornyl diphosphate synthase, chloroplastic OS=Salvia officinalis PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.133e-22 Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = -2 Query: 259 DIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQP 603 DI+ + I RL DDLGTS E+ RGDVPK+IQCYM ET ASEE A EH+K ++R+ WK +N A P N+ R++ F+YLHGDG GVQ+ +T + LLF+P Sbjct: 483 DILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIA-AGYPFPDGMVAGAANIGRVAQFIYLHGDGFGVQHSKTYEHIAGLLFEP 596
BLAST of DN618270 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.298e-19 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = -2 Query: 301 DIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHETGASEEVAREHIKDMMRQMWKKVNAYTADKDSPLTRTTAEFLLNLVRMSHFMYLH-GDGHGVQN 603 DIV S I RL DD+GTS DE++RGDVPKS+QCYM+E ASEE AREH++ ++ Q WK +N S ++ + NL RM+ ++Y H DG G+Q+ Sbjct: 476 DIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEM--MTSSFSKYFVQVSANLARMAQWIYQHESDGFGMQH 575 The following BLAST results are available for this feature:
BLAST of DN618270 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618270 ID=DN618270; Name=DN618270; organism=Citrus sinensis; type=EST; length=607bpback to top |