DN618268

Overview
NameDN618268
Unique NameDN618268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.655e-28
Identity = 65/88 (73.86%), Postives = 67/88 (76.14%), Query Frame = -1
Query:  233 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 496
            AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+TGT+MRRKMWLQNM                  LSVCHGF C
Sbjct:  132 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIKLIVLAIIIALILIIVLSVCHGFKC 219          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 4.816e-28
Identity = 64/90 (71.11%), Postives = 67/90 (74.44%), Query Frame = -1
Query:  227 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCGK 496
            AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GT+MRRKMW QNM                  LS+C GFNCGK
Sbjct:  132 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIKLIVLAIIIALILIIILSICGGFNCGK 221          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 4.508e-26
Identity = 59/88 (67.05%), Postives = 65/88 (73.86%), Query Frame = -1
Query:  233 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 496
            +KVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GTKM+RK+W +NM                  LSVCHGF C
Sbjct:  132 SKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIKLIVFGIIVALILIIILSVCHGFKC 219          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.713e-25
Identity = 60/88 (68.18%), Postives = 64/88 (72.73%), Query Frame = -1
Query:  233 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 496
            AKVKAQV+EVKGVMMENIEKVLDRGEKIELLVDKTENL  QAQDFR+ GTK+RRKMW +NM                  LSVC GF C
Sbjct:  197 AKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIKLIVLGIIITLILIIILSVCGGFKC 284          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 7.447e-21
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = -1
Query:  233 KVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 493
            KVKAQVSEVK +M+ENI+K +DRGE + +L DKTENL  QAQ+++  GT++RRK+W QNM                  +SVCHGFNC
Sbjct:  134 KVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIKLVVLGILLLLVLIIWISVCHGFNC 220          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19
Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = -1
Query:  233 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNC 496
            +K+KAQ++EVKG+MM+NIEKVLDRGEKIELLVDKTENL  QA  F+  G ++RRKMWLQ++                  +  C GF C
Sbjct:  151 SKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMKLMVAGAVFSFILIVWVVACGGFKC 238          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.172e-12
Identity = 44/90 (48.89%), Postives = 49/90 (54.44%), Query Frame = -1
Query:  227 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHGFNCGK 496
            AK KAQVSEVK +MMENIEKVL RG   E+L     +   Q Q F    T+M+RK W QNM                  LSVC GFNCGK
Sbjct:  132 AKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIKLIVLAIIIALILIIILSVCGGFNCGK 217          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 6.319e-12
Identity = 34/85 (40.00%), Postives = 49/85 (57.65%), Query Frame = -1
Query:  242 AKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 496
            +++K ++S+V+ VM+ENI+KVLDRGE++ELLVDKTEN+      FR    + R  MW +N+                    VCHG
Sbjct:  129 SRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTIALILVLALVVYIAMAFVCHG 213          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.136e-11
Identity = 27/59 (45.76%), Postives = 45/59 (76.27%), Query Frame = -1
Query:  317 KVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQN 493
            +V+ +VSE++ VM+ENIEK+++RG++IELLVDKT  +   +  FR    ++RR +W++N
Sbjct:  130 RVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188          
BLAST of DN618268 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 6.987e-11
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = -1
Query:  242 KVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLHQQAQDFRSTGTKMRRKMWLQNMXXXXXXXXXXXXXXXXXXLSVCHG 493
            ++K ++++V+GVM+ENI+KVLDRGE++ELLVDKT N+      FR    + R  +W +N                     +CHG
Sbjct:  129 RIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTVLLILLLLVIIYIAVAFLCHG 212          
The following BLAST results are available for this feature:
BLAST of DN618268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VA721_ARATH1.655e-2873.86Vesicle-associated membrane protein 721 OS=Arabido... [more]
VA722_ARATH4.816e-2871.11Vesicle-associated membrane protein 722 OS=Arabido... [more]
VA726_ARATH4.508e-2667.05Putative vesicle-associated membrane protein 726 O... [more]
VA725_ARATH1.713e-2568.18Vesicle-associated membrane protein 725 OS=Arabido... [more]
VA724_ARATH7.447e-2152.87Vesicle-associated membrane protein 724 OS=Arabido... [more]
VA727_ARATH1.405e-1953.41Vesicle-associated membrane protein 727 OS=Arabido... [more]
VA723_ARATH2.172e-1248.89Vesicle-associated membrane protein 723 OS=Arabido... [more]
VA713_ARATH6.319e-1240.00Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA714_ARATH3.136e-1145.76Vesicle-associated membrane protein 714 OS=Arabido... [more]
VA711_ARATH6.987e-1136.90Vesicle-associated membrane protein 711 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02F10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618268 ID=DN618268; Name=DN618268; organism=Citrus sinensis; type=EST; length=496bp
TTTTTTTTTTTTTTTTGTGCCAAGTATTCTCACAATATAATAGACGGGAC
TCATTCACAAGCAAAAATAAGTTTTCGGTTTTCTTTGTAACAAATATAGG
GAAACTGCTAACTTTTTTAGACTAAATACAAAGTCAAGATCATATATATT
TATATATCTCTTTCACAATATCATCACAGAAGCTCTTAGAAGAGCGTAAT
ATAAGCCTCCTGGAGAATAGCACTCATTTTCCGCAGTTGAAACCATGGCA
AACAGAGAGGACTATGATGAGGATCAAGGCAATCAGTATTCCCAAAACAA
TCAGCTTGATCTTCATATTTTGCAGCCACATTTTCCTCCGCATTTTGGTC
CCCGTACTCCGAAAGTCTTGTGCCTGCTGATGAAGGTTCTCAGTCTTATC
GACCAGTAGCTCAATCTTTTCCCCCCTATCTAAAACCTTTTCAATATTCT
CCATCATAACACCTTTGACTTCTGAAACCTGAGCCTTAACCTTCGC
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