DN618262

Overview
NameDN618262
Unique NameDN618262
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 2.078e-100
Identity = 186/208 (89.42%), Postives = 197/208 (94.71%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVV 624
            LVRGTKTL+L+K+GFP GKYLFAGVVDGRNIWAND AASLS L+ LEG+VGKDKLVVSTSCSLLHTAVDL+NE KLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE  FSANAAA ASR+SSPRVTNE VQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRREYKAKK+SEE+YV +IKEEI KVV
Sbjct:  268 LVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKLVVSTSCSLLHTAVDLINETKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEALFSANAAALASRRSSPRVTNEGVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKVSEEDYVKAIKEEIKKVV 475          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.759e-99
Identity = 185/209 (88.52%), Postives = 197/209 (94.26%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVRGTKTL+L+K+ FP+GKYLFAGVVDGRNIWANDLAASL+ L  LEGVVGKDKLVVSTSCS LHTAVDL+NE KLDDEIKSWLAFAAQKV+EVNALAKAL+GQKDE FFSANAAA ASRKSSPRVTNE VQKAA ALKGSDHRRAT VS+RLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRREYKAKKISEEEYV +IKEEI+KVVK
Sbjct:  268 LVRGTKTLDLVKAEFPSGKYLFAGVVDGRNIWANDLAASLATLEALEGVVGKDKLVVSTSCSFLHTAVDLINETKLDDEIKSWLAFAAQKVLEVNALAKALSGQKDEAFFSANAAALASRKSSPRVTNEAVQKAATALKGSDHRRATTVSSRLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREYKAKKISEEEYVKAIKEEISKVVK 476          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 1.759e-99
Identity = 185/209 (88.52%), Postives = 198/209 (94.74%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVRG KTL+LIK GFP+GKYLFAGVVDGRNIWANDLAASLS L+ LEG+VGKDKLVVSTSCSLLHTAVDLVNE KLD EIKSWLAFAAQKVVEVNALAKALAG+KDE FFS NAAAQASRKSSPRVTN+ VQKAAAAL+GSDHRRAT VSARLDAQQKKLNLP+LPTTTIGSFPQT+ELRRVRREYKAKKISE++YV +IKEEI+KVVK
Sbjct:  268 LVRGAKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLQSLEGIVGKDKLVVSTSCSLLHTAVDLVNEPKLDKEIKSWLAFAAQKVVEVNALAKALAGEKDEAFFSENAAAQASRKSSPRVTNQAVQKAAAALRGSDHRRATTVSARLDAQQKKLNLPVLPTTTIGSFPQTLELRRVRREYKAKKISEDDYVKAIKEEISKVVK 476          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 2.628e-95
Identity = 177/209 (84.69%), Postives = 192/209 (91.87%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVRG +T+ELIK GFP+GKYLFAGVVDGRNIWANDLA+S++ L+ LEG+VGKDKLVVSTS SLLHTAVDLVNE KLD EIKSWLAFAAQK+VEVNALAKAL G KDE FFS NAAAQASRKSSPRV NE VQKAAAAL+GS+HRR TNVSARLDAQQKKLNLPILPTTTIGSFPQT+ELRRVRRE+K  +ISEEEYV +IKEEINKVVK
Sbjct:  267 LVRGAQTIELIKGGFPSGKYLFAGVVDGRNIWANDLASSITTLQALEGIVGKDKLVVSTSSSLLHTAVDLVNEPKLDQEIKSWLAFAAQKIVEVNALAKALTGHKDEAFFSPNAAAQASRKSSPRVNNEAVQKAAAALRGSEHRRVTNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKPTRISEEEYVKAIKEEINKVVK 475          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.982e-43
Identity = 95/210 (45.24%), Postives = 132/210 (62.86%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD-EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVRGT+ L+ + +  PAG+ L AG+V+GRNIW  DL  +L++ R  +G VG D+L ++ SCSLLH  VDL  E  LD ++++WLAFA QK+ E+  LA AL  + + E   +    A  +R+ SP+V    V +  AAL     RR T    R  AQQ  LNLP  PTTTIGSFPQT+E+R  R ++K+ K+SE +Y A +K E  + V+
Sbjct:  266 LVRGTEQLDAVLNTLPAGRVLSAGLVNGRNIWRTDLDNALTMARYAQGHVGADRLWLAPSCSLLHVPVDLEQEKNLDADVRNWLAFAKQKLSELRVLADALDNKPEAETALTQTRQALEARRQSPKVHRPDVAQRLAALTPDTTRRNTAYPQRSQAQQHTLNLPAYPTTTIGSFPQTLEVREARAQFKSGKLSESDYEAFLKAETERCVR 475          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.982e-43
Identity = 95/210 (45.24%), Postives = 132/210 (62.86%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKD-EGFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVRGT+ L+ + +  PAG+ L AG+V+GRNIW  DL  +L++ R  +G VG D+L ++ SCSLLH  VDL  E  LD ++++WLAFA QK+ E+  LA AL  + + E   +    A  +R+ SP+V    V +  AAL     RR T    R  AQQ  LNLP  PTTTIGSFPQT+E+R  R ++K+ K+SE +Y A +K E  + V+
Sbjct:  266 LVRGTEQLDAVLNTLPAGRVLSAGLVNGRNIWRTDLDNALTMARYAQGHVGADRLWLAPSCSLLHVPVDLEQEKNLDADVRNWLAFAKQKLSELRVLADALDNKPEAETALTQTRQALEARRQSPKVHRPDVAQRLAALTPDTTRRNTAYPQRSQAQQHTLNLPAYPTTTIGSFPQTLEVREARAQFKSGKLSESDYEAFLKAETERCVR 475          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BURTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metE PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.976e-42
Identity = 96/206 (46.60%), Postives = 133/206 (64.56%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEI 612
            LVRG   L+   + +PA K L  G+VDGRN+W NDL  SL+ L  +   +G ++L ++TSCSLLH  VDL +E KLDDE+K+WLAFA QK  EV AL  ALA  +      F A A A A+R++S R+ N  V++  AAL  +D RRA+   AR  AQ+ + +LP LPTTTIGSFPQT E+RR R  ++   +    Y+ +++E++
Sbjct:  265 LVRGDAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVHETLG-ERLWIATSCSLLHAPVDLAHEPKLDDELKAWLAFAVQKTREVAALRDALAKGRAAVAAEFDAAAVAAAARRTSARIHNPLVKRRVAALTDADARRASAYPARAAAQRARFDLPPLPTTTIGSFPQTPEIRRARAAFRQGVLDHLGYLEAMREQV 469          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.371e-42
Identity = 99/211 (46.92%), Postives = 135/211 (63.98%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDEGF--FSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEINKVVK 627
            LVR  + LE   + +PA K L AGVVDGRNIW  DL  +L+ +  L   +G ++L ++ SCSLLH  VDL  E +LDDE+K WLAFA QK+ E+  L +A+   +D      + +AAA ASR +S RV N+ V+K AAA++  D  RA     R  AQQ +LNLP+LPTTTIGSFPQT E+R+ R +YK  ++    Y+  ++ EI  VV+
Sbjct:  263 LVRAPQQLEAF-APWPADKVLSAGVVDGRNIWRTDLEQALARVAPLAQTLG-ERLWLAPSCSLLHVPVDLAAETRLDDELKGWLAFARQKLDELAVLKRAVIDGRDAAHAALAGSAAAIASRAASRRVHNDSVKKRAAAIRAQDAERAAPYPVRAAAQQARLNLPLLPTTTIGSFPQTAEIRQARAQYKRGELQALTYLERMRAEIADVVQ 471          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BURP6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 668) GN=metE PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.403e-42
Identity = 95/206 (46.12%), Postives = 132/206 (64.08%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEI 612
            LVR    L+   + +PA K L  G+VDGRN+W NDL  SL+ L  +   +G ++L V+TSCSLLH  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   AAA A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++
Sbjct:  265 LVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVRDALG-ERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASTYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQV 469          
BLAST of DN618262 vs. ExPASy Swiss-Prot
Match: METE_BURPS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei GN=metE PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 7.510e-42
Identity = 95/206 (46.12%), Postives = 132/206 (64.08%), Query Frame = 1
Query:    1 LVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLAASLSVLRGLEGVVGKDKLVVSTSCSLLHTAVDLVNENKLDDEIKSWLAFAAQKVVEVNALAKALAGQKDE--GFFSANAAAQASRKSSPRVTNERVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTIELRRVRREYKAKKISEEEYVASIKEEI 612
            LVR    L+   + +PA K L  G+VDGRN+W NDL  SL+ L  +   +G ++L V+TSCSLLH  VDL +E +LD+E+K+WLAFAAQK  EV AL  AL   +      F   AAA A+R++S R+ N  V++  AAL  +D RRA+  S R  AQ+ +  LP+LPTTTIGSFPQT E+RR R  +K   +    Y+ +++E++
Sbjct:  265 LVRADAQLDAFVADYPADKVLSCGIVDGRNVWRNDLDRSLARLAPVRDALG-ERLWVATSCSLLHVPVDLAHEPRLDEELKTWLAFAAQKTREVAALRDALVKGRAAVAAEFDDAAAAAAARRTSARIHNPLVKRRVAALTDADARRASAYSVRAAAQRARFGLPLLPTTTIGSFPQTPEIRRARAAFKQGVLDHLGYLEAMREQV 469          
The following BLAST results are available for this feature:
BLAST of DN618262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 269
Match NameE-valueIdentityDescription
METE_ARATH2.078e-10089.425-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR1.759e-9988.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO1.759e-9988.525-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC2.628e-9584.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT3.982e-4345.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF23.982e-4345.245-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURTA1.976e-4246.605-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO3.371e-4246.925-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP64.403e-4246.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPS7.510e-4246.125-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02F07_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618262 ID=DN618262; Name=DN618262; organism=Citrus sinensis; type=EST; length=628bp
TTGGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGC
TGGCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCA
ATGATCTTGCTGCTTCTCTTAGTGTTCTCCGGGGGCTTGAGGGTGTTGTT
GGCAAAGACAAGCTTGTGGTCTCCACCTCCTGCTCACTTCTTCACACTGC
TGTTGATCTTGTTAATGAGAACAAACTCGACGATGAAATCAAGTCATGGC
TGGCATTTGCTGCCCAGAAAGTTGTTGAAGTGAATGCATTGGCCAAGGCT
TTGGCTGGCCAAAAGGATGAGGGATTCTTCTCTGCCAATGCTGCAGCTCA
GGCTTCAAGAAAGTCCTCCCCGAGAGTGACCAATGAGAGAGTTCAAAAGG
CTGCTGCTGCTTTGAAGGGATCAGACCACAGACGTGCTACAAACGTTAGT
GCTAGATTGGATGCTCAACAGAAGAAGCTCAATCTTCCAATCCTCCCAAC
CACCACAATTGGATCCTTCCCACAAACCATTGAACTTAGGAGAGTCCGCC
GTGAATACAAGGCTAAGAAGATTTCTGAGGAAGAATATGTTGCTTCCATC
AAGGAGGAAATCAACAAGGTTGTCAAAC
back to top