DN618252

Overview
NameDN618252
Unique NameDN618252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 2.925e-40
Identity = 87/138 (63.04%), Postives = 102/138 (73.91%), Query Frame = 1
Query:  121 RIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENM-TDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            RI+G  GVGINYGQIANN              NI+RVKLYD DP VL +FSNS VDF+IGLGNEYL+NM TDP KAQ W+QQRL+PH+ +TRIT I+VGNE+FK  D  L   LLPAM++VY  L +LGL+KQV VTS
Sbjct:   23 RIKG-QGVGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTS 159          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.744e-30
Identity = 62/130 (47.69%), Postives = 83/130 (63.85%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +G+NYGQI +N                ++VKLYD +P +L AFSN+ ++FIIGLGNEYL  M DP KA +WI+Q + P LP T ITCI +GNE+    D+ L + LLPAMQ V+  L+  GL  Q+ VT+
Sbjct:   29 IGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTT 158          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.153e-28
Identity = 62/140 (44.29%), Postives = 87/140 (62.14%), Query Frame = 1
Query:  112 SVPRIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            S+P I  +  +GINYGQ+ANN                ++VKLYD DP  L AF+ S  +  + LGNEYL  M+DP KAQ W+++ +Q +LP T+I  I+VGNEV     + L + L PAMQ+++  LVD GL+KQ+ VT+
Sbjct:   19 SLPLI--VSSIGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTVALGNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTT 156          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13A_SOLLC (Glucan endo-1,3-beta-glucosidase A OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.147e-18
Identity = 45/138 (32.61%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  121 RIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYS-YLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +I G   +G+ YG+IANN              NI ++++Y  +  V +A   SN++ I+ + N+ LE + +P K Q W+Q  ++ H P  +   I VGNEV  G D+  Y+ ++ PAM+ +Y  L   GL  Q+ V++
Sbjct:   19 QITGAQPIGVCYGKIANNLPSDQDVIKLYNSNNIKKMRIYFPETNVFNALKGSNIEIILDVPNQDLEALANPSKRQGWVQDNIRNHFPDVKFKYIAVGNEVDPGRDSGKYARFVGPAMENIYNALSSAGLQNQIKVST 156          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 9.156e-18
Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = 1
Query:  118 PRIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENM-TDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            P     P +G+NYGQ+A+N              +I +V+LY  DP ++ A + + V  +IG  N  + ++ +DP  A  WI   + P  P ++I  I VGNE+    D  L + LLPAMQ V K L  + L  ++ V++
Sbjct:   18 PSSHAEPFIGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVST 156          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13G_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GI9 OS=Nicotiana tabacum GN=PR2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.935e-17
Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  130 GLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            G   +G+ YG+ ANN               I ++++Y+ D  V +A   SN++ I+ +  + L+++TDP +A  W+Q  +  H P  +   I VGNEV  G + +   ++ PAMQ VY  L   GL  Q+ V++
Sbjct:   28 GAQSIGVCYGKHANNLPSDQDVINLYNANGIRKMRIYNPDTNVFNALRGSNIEIILDVPLQDLQSLTDPSRANGWVQDNIINHFPDVKFKYIAVGNEVSPGNNGQYAPFVAPAMQNVYNALAAAGLQDQIKVST 161          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 7.255e-15
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 1
Query:  112 SVPRIQGLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENM-TDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDT-KLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            S   I G   VG+ YG + NN              NI R++LYD +   L A   SN++ ++G+ N  L+N+  +P  A +W+Q+ ++   P  +   I VGNEV     T  L  YLLPAM+ +   +   GL   + V+S
Sbjct:   23 SSTEIVGAQSVGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSS 164          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13C_TOBAC (Glucan endo-1,3-beta-glucosidase OS=Nicotiana tabacum GN=SP41A PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 9.475e-15
Identity = 37/130 (28.46%), Postives = 68/130 (52.31%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +G+ YG+IANN               I ++++Y++D  +  + + SN++ I+ + N+ LE + +   A  W+Q  ++ H P  +   I +GNEV    + +   +LL AM+ VY  L   GL  ++ VT+
Sbjct:   36 IGVCYGKIANNLPSEQDVINLYKANGIRKMRIYNSDTNIFKSLNGSNIEIILDVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNEVSPSNNGQYSQFLLHAMENVYNALAAAGLQDKIKVTT 165          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.757e-14
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  142 VGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENM-TDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFK-GEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            +GI YG + NN              NI R++LYD +   L+A  +S ++ I+G+ N  L+ + T+   A+ W+Q+ +    P  +I  I VGNEV   G  + L  Y+LPA Q VY+ +   GL  Q+ VT+
Sbjct:   34 IGICYGMMGNNLPPANEVIALYKANNIKRMRLYDPNQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQIKVTT 165          
BLAST of DN618252 vs. ExPASy Swiss-Prot
Match: E13L_TOBAC (Glucan endo-1,3-beta-glucosidase, acidic isoform GL153 OS=Nicotiana tabacum GN=GGL4 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.601e-14
Identity = 39/134 (29.10%), Postives = 66/134 (49.25%), Query Frame = 1
Query:  130 GLPGVGINYGQIANNXXXXXXXXXXXXXXNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPGKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDTKLYSYLLPAMQTVYKTLVDLGLDKQVIVTS 531
            G   +G+ YG+IANN               I ++++Y  D  +  A   SN++ I+ + N+ LE + +   A  W+Q  ++ H P  +   I +GNEV    + +   +LL AM+ VY  L   GL  ++ VT+
Sbjct:   28 GAQSIGVCYGKIANNLPSEQDVINLYKANGIRKMRIYYPDKNIFKALKGSNIEIILDVPNQDLEALANSSIANGWVQDNIRSHFPYVKFKYISIGNEVSPINNGQYSQFLLHAMENVYNALAASGLQDKIKVTT 161          
The following BLAST results are available for this feature:
BLAST of DN618252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
E1314_ARATH2.925e-4063.04Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E1311_ARATH2.744e-3047.69Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1310_ARATH1.153e-2844.29Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E13A_SOLLC3.147e-1832.61Glucan endo-1,3-beta-glucosidase A OS=Solanum lyco... [more]
E137_ARATH9.156e-1833.09Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13G_TOBAC5.935e-1731.34Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]
GUB_NICPL7.255e-1532.39Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]
E13C_TOBAC9.475e-1528.46Glucan endo-1,3-beta-glucosidase OS=Nicotiana taba... [more]
E13B_PEA2.757e-1434.09Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13L_TOBAC3.601e-1429.10Glucan endo-1,3-beta-glucosidase, acidic isoform G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02F02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618252 ID=DN618252; Name=DN618252; organism=Citrus sinensis; type=EST; length=531bp
GCAANTTTGCTTCGCTTGGCTGCCAAAATCATCAGATCAATAATGGGCAG
CTTCAGCTTCAGCTTCAGTTCCATCGTTAAACTCTCTCTCTTCTTTCTCA
TTCTTTCAGATTCAGTACCCAGAATCCAAGGCCTTCCAGGAGTTGGAATT
AACTATGGCCAGATAGCAAACAATCTGCCATCCCCATCCCGTGTCTCGGT
CCTCTTAAGATCTCTCAACATCAGCAGAGTTAAACTCTACGACACAGATC
CCGTCGTCCTCTCGGCATTCTCCAACAGTAACGTAGACTTCATCATTGGC
CTAGGCAACGAGTACCTCGAAAACATGACTGATCCGGGCAAGGCACAGAG
TTGGATCCAACAGCGGCTTCAGCCCCATCTCCCTCAGACAAGAATCACTT
GCATACTAGTAGGCAATGAAGTGTTCAAAGGTGAGGACACCAAGCTATAC
TCGTATCTCCTCCCAGCTATGCAAACGGTGTATAAAACGCTCGTTGATCT
TGGCCTTGATAAGCAAGTTATTGTCACATCC
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