DN618245

Overview
NameDN618245
Unique NameDN618245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.086e-33
Identity = 72/94 (76.60%), Postives = 81/94 (86.17%), Query Frame = -2
Query:  330 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNEDPAEPEVE 611
            FGNRMLKQFVVAE EIQDLE+D   ELLVLASDGLWDVVPNEDAVALA++ EEPE AARKLT+TAF+RGSADNITCIVV+F H  +    P++E
Sbjct:  267 FGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQSEEEPEAAARKLTDTAFSRGSADNITCIVVKFRH--DKTESPKIE 358          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.819e-30
Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = -2
Query:  351 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHHVNED 611
            FGNR+LKQFVVA+ EIQ+ E+D+  E L+LASDGLWDVVPNEDAV+L +  EEPE AARKLTETAF+RGS DNITCIVV+F H   D
Sbjct:  395 FGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVKIEEEPEAAARKLTETAFSRGSGDNITCIVVKFQHDKMD 481          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.500e-27
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = -2
Query:  363 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHH 611
            FGNR+LK FVVAE EIQ+  V+E  E LVLASDGLWDVV NE+AV+LA+T + PE  ARKLTE A++RGSADNITCIVV+FHH
Sbjct:  277 FGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAKTEDLPESVARKLTEIAYSRGSADNITCIVVQFHH 359          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.601e-25
Identity = 56/83 (67.47%), Postives = 64/83 (77.11%), Query Frame = -2
Query:  363 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHH 611
            FGNR LK+FVVAE E+Q+ E+D+  E L+LASDGLWDVV NE AVA  +  E PE AARKL E AF RGS DNITCIVV+F H
Sbjct:  281 FGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVKAEEGPEAAARKLAEIAFARGSTDNITCIVVKFLH 363          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.820e-22
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG+R+LKQ+VVA+ EIQ+ +VD   E L+LASDGLWDVV NE+AV + +  E+PE  A++L   A+ RGSADNITC+VVRF
Sbjct:  199 FGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIKAIEDPEEGAKRLMMEAYQRGSADNITCVVVRF 279          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22
Identity = 48/81 (59.26%), Postives = 64/81 (79.01%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG+R+LKQ+VVA+ EIQ+ ++D+  E L+LASDGLWDV  NE+AVA+ +  E+PE + +KL   A  RGSADNITC+VVRF
Sbjct:  199 FGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSADNITCVVVRF 279          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22
Identity = 49/83 (59.04%), Postives = 65/83 (78.31%), Query Frame = -2
Query:  363 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHH 611
            FGNR++K++V AE  IQ+  VDEG E LVLA+DGLWDV+ NEDAV+L +  + P+ AA KLTE A +R + DN+TCIV++FHH
Sbjct:  289 FGNRLMKRYVKAEPNIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLKAQDGPKAAAMKLTEVARSRLTLDNVTCIVLQFHH 371          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.074e-21
Identity = 49/81 (60.49%), Postives = 64/81 (79.01%), Query Frame = -2
Query:  369 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRF 611
            FG+R+LKQ+VVA+ EIQ+ ++D+  E L+LASDGLWDV  NE AVA+ +  E+PE +A+KL   A  RGSADNITC+VVRF
Sbjct:  199 FGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVKEVEDPEDSAKKLVGEAIKRGSADNITCVVVRF 279          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.392e-21
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = -2
Query:  363 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHH 611
            FGNR LK +V AE +IQ+  VDE  E L+LA+DGLWDV+ NEDAV+L +  + P+ AA KLTE A +R + DNITCIV++FHH
Sbjct:  263 FGNRALKHYVKAEPDIQEKVVDESLEYLILATDGLWDVMRNEDAVSLLKAQDGPKAAAMKLTEVAHSRLTLDNITCIVLQFHH 345          
BLAST of DN618245 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.187e-20
Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = -2
Query:  363 FGNRMLKQFVVAEXEIQDLEVDEGFELLVLASDGLWDVVPNEDAVALARTGEEPEIAARKLTETAFTRGSADNITCIVVRFHH 611
            FG+++LKQ+VV + EI++  +D   E L+LASDGLWDVV NE+AV + R+  +PE AA+KL + A+ R S+DNITC+VVRF H
Sbjct:  192 FGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVRFLH 274          
The following BLAST results are available for this feature:
BLAST of DN618245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
P2C76_ARATH2.086e-3376.60Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C52_ORYSJ2.819e-3072.41Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C13_ORYSJ6.500e-2772.29Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C07_ORYSJ1.601e-2567.47Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C59_ARATH4.820e-2260.49Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C71_ARATH8.222e-2259.26Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C55_ORYSJ8.222e-2259.04Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C69_ARATH1.074e-2160.49Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C56_ORYSJ2.392e-2159.04Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C45_ORYSJ1.187e-2055.42Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618245 ID=DN618245; Name=DN618245; organism=Citrus sinensis; type=EST; length=612bp
TTTTTAAACTACGAAAACCTTTGAGTTTTTATTAACTTAAGACCGAAATA
CCCAGAACGGGCATTTAGACATACAGATTTACAGGCCACATTATGGAGCG
AAGAGGAATAGTTATTCTGGAATGAACCAAGACTCAATATATGCAGTCAA
TACAGAAAGGTTCAAATTAGGGGGGTGCGGGGAAAAAAAAGAAACAATGA
ATAAAAAAATCGCCTTCCTCCCTGTTGCTATGCACATTCAGCCATGCATG
TGCAGATTTCCAGATGATCTACAGCCTAAAGGGTCGATAAACCTACACCA
TGCAACATAAATGAAGATTCCTACTCCTGCTCCACTTCAGGTTCGGCTGG
ATCTTCATTGACGTGGTGGAATCTCACTACAATGCACGTTATGTTGTCAG
CACTGCCTCGGGTAAAAGCAGTCTCCGTTAACTTCCGAGCTGCGATTTCA
GGTTCTTCCCCTGTTCGGGCAAGTGCAACAGCATCCTCATTGGGTACTAC
ATCCCATAGTCCATCACTTGCAAGCACAAGCAGCTCAAATCCTTCATCTA
CTTCAAGGTCCTGGATCTCANGTTCCGCAACGACAAATTGCTTCAGCATG
CGGTTACCAAAA
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