DN618239

Overview
NameDN618239
Unique NameDN618239
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT1_ARATH (Adenine phosphoribosyltransferase 1 OS=Arabidopsis thaliana GN=APT1 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.001e-29
Identity = 62/77 (80.52%), Postives = 71/77 (92.21%), Query Frame = -2
Query:  363 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 593
            YSLEYG D +EMHVGAV+ GERA+I+DDL+ATGGTL+AAIRLLERVGV +VECACVIELPELKG+E+LGE  LFVLV
Sbjct:  163 YSLEYGTDTIEMHVGAVEPGERAIIIDDLIATGGTLAAAIRLLERVGVKIVECACVIELPELKGKEKLGETSLFVLV 239          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum GN=APT1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.562e-27
Identity = 58/77 (75.32%), Postives = 67/77 (87.01%), Query Frame = -2
Query:  363 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 593
            YSLEYG D +EMHVGAVQ  +R LIVDDL+ATGGTL AA +L+ERVG  VVECACVIELPELKGR++LG+ P+FVLV
Sbjct:   99 YSLEYGTDKIEMHVGAVQPNDRVLIVDDLIATGGTLCAAAKLIERVGAKVVECACVIELPELKGRDKLGDMPVFVLV 175          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT2_ARATH (Adenine phosphoribosyltransferase 2 OS=Arabidopsis thaliana GN=APT2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.023e-22
Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = -2
Query:  363 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 593
            Y LEYG+D +EM V AV++ ERALI+DDLVATGGTLSA+I LLER G  VVECACV+ LP+ KG+ +L  KPL+VLV
Sbjct:  106 YELEYGRDCLEMSVEAVKSEERALIIDDLVATGGTLSASINLLERAGAEVVECACVVGLPKFKGQCKLKGKPLYVLV 182          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_DESOH (Adenine phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=apt PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = -2
Query:  363 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 593
            YSLEYG+ ++E+H  A+  GER ++VDDL+ATGGT+ A I L+E++G  VVECA VI+LP+LKGRE++ +  +F L+
Sbjct:   92 YSLEYGESMVEIHEDAILKGERVVVVDDLIATGGTVKATIDLVEKLGGEVVECAFVIDLPDLKGREKIRDYKMFALM 168          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_LYSSC (Adenine phosphoribosyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=apt PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.444e-17
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = -2
Query:  363 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 593
            Y LEYGKD + MH  A++ G++ LI DDL+ATGGT+ A +RL+E++G  VV CA +IEL EL GRE+LG+  +  L+
Sbjct:   92 YGLEYGKDTLTMHNDAIKPGQKVLICDDLLATGGTVEATVRLVEQLGGQVVGCAFLIELLELNGREKLGDLNIKTLI 168          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_BORPD (Adenine phosphoribosyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=apt PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.722e-17
Identity = 42/80 (52.50%), Postives = 59/80 (73.75%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE--KPLFVLVS 593
            Y+LEYG   +EMH  +V+ G+R L+VDDL+ATGGT+ AAI+LL+R+G +VVE A +I+LPEL G  ++     PLF + S
Sbjct:   98 YTLEYGNSSVEMHTDSVRTGQRVLLVDDLIATGGTMLAAIKLLQRLGANVVEAAAIIDLPELGGSGKVAATGTPLFTVCS 177          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_RHOSK (Adenine phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=apt PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16
Identity = 40/68 (58.82%), Postives = 55/68 (80.88%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG+ V+E+H  A+QAGE+ L+VDDL+ATGGT  A I+L+E++G  VV CA V++LP+L GR+RL
Sbjct:   95 YQLEYGEAVVEVHDDAIQAGEKVLLVDDLLATGGTAEAGIKLIEQLGGQVVGCAFVVDLPDLGGRKRL 162          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_RHOS4 (Adenine phosphoribosyltransferase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=apt PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16
Identity = 40/68 (58.82%), Postives = 55/68 (80.88%), Query Frame = -2
Query:  390 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 593
            Y LEYG+ V+E+H  A+QAGE+ L+VDDL+ATGGT  A I+L+E++G  VV CA V++LP+L GR+RL
Sbjct:   95 YQLEYGEAVVEVHDDAIQAGEKVLLVDDLLATGGTAEAGIKLIEQLGGQVVGCAFVVDLPDLGGRKRL 162          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_METPP (Adenine phosphoribosyltransferase OS=Methylibium petroleiphilum (strain PM1) GN=apt PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16
Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = -2
Query:  360 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL--GEKPLFVLVS 593
            Y LEYG   +E+H  AV+AG+R L++DDL+ATGGT+ A  RLLER+G  V+E A +++LPEL G  +L     PLF LVS
Sbjct:  113 YELEYGSAAVEIHTDAVKAGDRVLLIDDLIATGGTMMAGKRLLERLGATVIEGAAIVDLPELGGAAKLRAAGLPLFTLVS 192          
BLAST of DN618239 vs. ExPASy Swiss-Prot
Match: APT_LEPBL (Adenine phosphoribosyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=apt PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.270e-16
Identity = 39/79 (49.37%), Postives = 60/79 (75.95%), Query Frame = -2
Query:  366 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK---PLFVL 593
            Y LEYGKDV+E+H  AVQ G++ L++DDL+ATGGT+ AA++LL+++G  + E   +I+LP+L G ++L EK   P+F +
Sbjct:   93 YDLEYGKDVIEIHKDAVQPGDKILLMDDLIATGGTMIAAVKLLKKLGAQIYEAGVIIDLPDLGGSKKLQEKLEVPVFAI 171          
The following BLAST results are available for this feature:
BLAST of DN618239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT1_ARATH1.001e-2980.52Adenine phosphoribosyltransferase 1 OS=Arabidopsis... [more]
APT1_WHEAT3.562e-2775.32Adenine phosphoribosyltransferase 1 OS=Triticum ae... [more]
APT2_ARATH2.023e-2267.53Adenine phosphoribosyltransferase 2 OS=Arabidopsis... [more]
APT_DESOH1.357e-1854.55Adenine phosphoribosyltransferase OS=Desulfococcus... [more]
APT_LYSSC7.444e-1753.25Adenine phosphoribosyltransferase OS=Lysinibacillu... [more]
APT_BORPD9.722e-1752.50Adenine phosphoribosyltransferase OS=Bordetella pe... [more]
APT_RHOSK1.270e-1658.82Adenine phosphoribosyltransferase OS=Rhodobacter s... [more]
APT_RHOS41.270e-1658.82Adenine phosphoribosyltransferase OS=Rhodobacter s... [more]
APT_METPP1.270e-1653.75Adenine phosphoribosyltransferase OS=Methylibium p... [more]
APT_LEPBL1.270e-1649.37Adenine phosphoribosyltransferase OS=Leptospira bo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618239 ID=DN618239; Name=DN618239; organism=Citrus sinensis; type=EST; length=594bp
CCCCCTTTTTTTTTTTTTATAAAGAGACGAGTTGAATTGCGGTTTAATTC
ACACATGATACATCAACAACCATCAGATAGAATCTCCAGATAATTTGAAA
AGCATCAAATACAGCTGTTTACGGGAAGATGGAATTTTTTCATAAGCCTA
TCATTCTTAAACCCAACAATAGCAGACAGAACCCAGCTTCCCCACCACTC
TTTCCCCAACGTCTTAAATAAAATAAAAAGCCAATGAAACTGCTCTTATA
TTACCAGATGGTTTTATGAAGTTCTCAAGCTTTGAGCAGAGCCCGAGCGA
CTAGAAACCCATATGGTCCACAAACATTGCATTTAAACCATAACCTGAGG
TCAAGTTTAGCTTACAAGAACAAATAGTGGTTTCTCTCCCAGCCGTTCCC
GACCCTTTAGCTCTGGCAGTTCAATCACGCATGCACACTCAACCACATGC
ACCCCAACTCGCTCAAGTAGCCTGATTGCAGCAGACAAGGTCCCACCAGT
TGCAACTAGATCGTCTACTATTAAAGCACGCTCCCCTGCTTGTACAGCAC
CTACATGCATCTCCATTACATCTTTTCCATATTCCAAGGAATAC
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