DN618235

Overview
NameDN618235
Unique NameDN618235
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length533
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618235 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.847e-16
Identity = 55/127 (43.31%), Postives = 71/127 (55.91%), Query Frame = -3 
Query:  121 DRKPNINISRQEVALGMPPHQGSPAPMMNDLLHMDTSDSVPRLQT-DSSCSEHVLSPEITCDKEVQSMPKWNDLGNALNDDYN--QFNFNYMDTNSFQDDPFGPQVQYQMDQLSPYQDLFMILQKPF 492
            + KP +     E+ +  PP Q S      +  + DTSDSVP+L T DSSCSE V+SPE T   EVQS PKW D     ND+ N   F FNY+D     D+ FG       +Q+ P QD+FM +QKP+
Sbjct:  179 EEKPKVT----EMVMPPPPQQTS------EFAYFDTSDSVPKLHTTDSSCSEQVVSPEFT--SEVQSEPKWKDWSAVSNDNNNTLDFGFNYIDAT--VDNAFGG--GGSSNQMFPLQDMFMYMQKPY 289
The following BLAST results are available for this feature:
BLAST of DN618235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NAC2_ARATH3.847e-1643.31NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02E17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618235 ID=DN618235; Name=DN618235; organism=Citrus sinensis; type=EST; length=533bp
TTGTTCATATATTAAAAAAATTTCTTCTACAATCTTGCACGAATAAGAAT
GCCCTACAATTGTGGTTTACAAAAGGATTATATAATACAGGACCTAGCAT
ACTACGATGTATTGAACTTAAAATGGCTTCTGCAGAATCATAAAAAGGTC
TTGATAGGGTGATAACTGATCCATCTGATACTGAACTTGCGGGCCAAAAG
GGTCGTCTTGGAAGCTATTAGTGTCCATGTAGTTGAAATTGAACTGATTA
TAATCATCATTCAAGGCATTGCCTAGATCATTCCATTTGGGCATACTTTG
GACCTCCTTATCGCACGTGATCTCCGGCGACAACACGTGCTCGGAGCAAC
TCGAATCCGTCTGCAACCGGGGCACCGAGTCCGACGTATCCATATGTAAT
AGGTCATTCATCATTGGCGCAGGCGATCCCTGATGTGGAGGCATTCCTAA
TGCTACCTCTTGACGTGAAATGTTAATATTTGGTTTCCGATCCTCCTCCA
GTTCTGGGAATCCAATTGATTTTTGATCGCTGG
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