DN618232

Overview
NameDN618232
Unique NameDN618232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.428e-54
Identity = 99/113 (87.61%), Postives = 109/113 (96.46%), Query Frame = -2
Query:  313 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 651
            SL E+LCGFQF++THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFM+GKLYIHF+V+FP+SL+P+QCK LE VLPPRTSVQL+DMELDECEETTLHDVNIEEEMRRK
Sbjct:  277 SLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRK 389          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.694e-53
Identity = 98/113 (86.73%), Postives = 106/113 (93.81%), Query Frame = -2
Query:  313 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 651
            SLTEALCGFQFV+THLDGRQLLIKS PGEVVKPDQFKAINDEGMPMYQRPFMRGKLYI F VDFP+SL+PDQCK++E+VLP   S QLTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  258 SLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRK 370          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.518e-53
Identity = 96/113 (84.96%), Postives = 106/113 (93.81%), Query Frame = -2
Query:  313 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 651
            SLTEALCGFQFV+THLD RQLLIKS PGEV+KPDQFK INDEGMPMYQRPFMRGKLYIHF+VDFP+SL+PDQCK LE+VLP R + +LTDME+DECEETT+HDVNIEEEMRRK
Sbjct:  279 SLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRK 391          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.755e-50
Identity = 92/113 (81.42%), Postives = 104/113 (92.04%), Query Frame = -2
Query:  313 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 651
            SLTEALCGFQFV+THLDGR LLIKS PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FP+SLSPDQ K LE VLP  ++ QL+DME+DECEETTLHDVNIE+EMRRK
Sbjct:  279 SLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.082e-49
Identity = 91/113 (80.53%), Postives = 104/113 (92.04%), Query Frame = -2
Query:  313 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 651
            SLTEALCGF+FV+THLDGRQLLIKS  GEVVKPDQFKAI DEGMP+YQRPFM+GK+YIHFTV+FP+SL+PDQ K LE +LPP+ S+ LT MELDECEETTLH+VNIEEEM+RK
Sbjct:  279 SLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRK 391          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.171e-48
Identity = 89/113 (78.76%), Postives = 103/113 (91.15%), Query Frame = -2
Query:  313 SLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPESLSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 651
            SLTEALCGFQFV+THLD RQLLIKS+PGEVVKPD +KAI+DEGMP+YQRPFM+GKLYIHFTV+FPESLSPDQ K +E VLP  T   ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  280 SLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = -2
Query:  316 LTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 648
            L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  266 LVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = -2
Query:  316 LTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 648
            L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  265 LVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 373          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = -2
Query:  316 LTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 648
            L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  266 LVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of DN618232 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.349e-20
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = -2
Query:  316 LTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFTVDFPES--LSPDQCKMLETVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 648
            L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F V+FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  266 LVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
The following BLAST results are available for this feature:
BLAST of DN618232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
DNJH_CUCSA1.428e-5487.61DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNJH1_ALLPO2.694e-5386.73DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH2_ALLPO3.518e-5384.96DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNAJ3_ARATH4.755e-5081.42Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH_ATRNU3.082e-4980.53DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ2_ARATH1.171e-4878.76Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA1_RAT1.349e-2046.02DnaJ homolog subfamily A member 1 OS=Rattus norveg... [more]
DNJA1_PONAB1.349e-2046.02DnaJ homolog subfamily A member 1 OS=Pongo abelii ... [more]
DNJA1_MOUSE1.349e-2046.02DnaJ homolog subfamily A member 1 OS=Mus musculus ... [more]
DNJA1_HUMAN1.349e-2046.02DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02E15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618232 ID=DN618232; Name=DN618232; organism=Citrus sinensis; type=EST; length=652bp
TTTTTTTTTTTTTTTTTGTAAACACTAAAAATATTAATTATGAGCATTGA
GTCTGAAGGTGCAACGCTAGAATTCCATTACATAGTCAGTTATCAGAAAA
ACATAAGAATAAAGACAGACAAACCAAAACTAGAACCTCTAAAGCCTATA
ACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAATGAAAATAC
TAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAGCACACTGC
ACTCTCTGGGCACCACCTTGCATATCGTCATCTTCATCGTATGCCTCCTG
AGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTCACATCATGCA
GGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAGCTGGACTGAG
GTCCTTGGAGGTAGTACGGTCTCCAGCATCTTGCACTGGTCTGGGCTCAG
TGACTCAGGGAAGTCAACAGTGAAATGAATGTACAGTTTGCCCCTCATAA
ATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCTTGAATTGG
TCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGTTGCCGGCC
ATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCTTCTGTCAGTG
AC
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