DN618222

Overview
NameDN618222
Unique NameDN618222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618222 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17
Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = -2
Query:  214 PGLVYDASYEDYLLYLCSHGFSFTNPVFRC---------PNKPPSALNLNYPSIAIPNLNGTVIVK--RTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGWYRWTDGLHLVRSPMAVSF 636
            PGL+YD + EDYL +LC+   ++T+P  R          P+K  S  +LNYPS A+ N++G    K  RTVT+VGG+ +          GV +   P++L F    +KKS+T+T  + S       +    FG   W+DG H+V SP+A+S+
Sbjct:  612 PGLIYDLTTEDYLGFLCA--LNYTSPQIRSVSRRNYTCDPSKSYSVADLNYPSFAV-NVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKP----SGSNSFGSIEWSDGKHVVGSPVAISW 756          
BLAST of DN618222 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.297e-16
Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = -2
Query:  217 PGLVYDASYEDYLLYLCSHGFS------FTNPVFRCPNKPPSAL-NLNYPSIAI---PNLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVF-GWYRWTDGLHLVRSPMAVS 636
            PGLVYDA+  DY+ +LC  G++       T     C +     + +LNYPS  +   P+        RT+T+V    S Y      P G+++  NP++L F+ +G +KSFT+TVR        G  K +V      W+DG+H VRSP+ ++
Sbjct:  586 PGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVR--------GSIKGFVVSASLVWSDGVHYVRSPITIT 728          
BLAST of DN618222 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.349e-12
Identity = 47/152 (30.92%), Postives = 71/152 (46.71%), Query Frame = -2
Query:  220 PGLVYDASYEDYLLYLCSHGFSFTN--PVFRCPNKPPSAL-------NLNYPSIAIP----NLNGTVIVKRTVTNVGGSKSVYFFSAKPPMGVSVKANPSILFFDHIGQKKSFTITVRLGSETTRQGLTKQYVFGWYRWTDGLHLVRSPMAV 636
            PGLVYD     Y+ +LC  G++ T   P+    +   S++       +LNYP+I +       +   + +R VTNVG   SVY  + + P GV +   P  L F    QK+SF + V+      +Q    + V G   W    H VRSP+ +
Sbjct:  597 PGLVYDMDDISYVQFLCGEGYNATTLAPLVGTRSVSCSSIVPGLGHDSLNYPTIQLTLRSAKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKASQKRSFKVVVK-----AKQMTPGKIVSGLLVWKSPRHSVRSPIVI 743          
The following BLAST results are available for this feature:
BLAST of DN618222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH2.268e-1736.18Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME7.297e-1633.77Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH8.349e-1230.92Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02E10_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618222 ID=DN618222; Name=DN618222; organism=Citrus sinensis; type=EST; length=637bp
AGGAGATTAATTTTATTACAGTTCAAATCCAAGAAAGGTAATACATATTT
TTCCTATCTGATAATCAATTTTCCCCAAAAACCACGCTTCAAACTGATTG
AAGCTCTAGAGATGTCTCATCTCTAATTTCTTTCTTTACGTTTCACTAAT
CTGGACAATGATTAAACCCAGAAAGAAAAGTTTATAAGAAAAGAGGAAAG
ATTCAATCTATGCGAAAGACACTGCCATTGGACTTCTCACGAGATGGAGT
CCATCTGTCCAGCGGTACCACCCAAAGACATACTGTTTAGTAAGACCCTG
CCTCGTTGTTTCGCTACCTAGTCTCACTGTAATGGTGAAGCTCTTCTTCT
GGCCAATATGATCGAAGAACAAAATGCTTGGATTTGCCTTGACGGAAACT
CCCATTGGTGGTTTTGCACTAAAGAAGTAGACACTCTTGCTGCCACCAAC
ATTTGTAACTGTCCTCTTCACAATCACAGTGCCATTCAGATTTGGAATGG
CGATTGATGGATAATTGAGGTTGAGGGCTGAGGGTGGCTTGTTCGGACAC
CTAAATACTGGGTTGGTAAATGAGAATCCGTGGCTGCAAAGGTAGAGAAG
ATAGTCTTCGTATGAGGCGTCGTACACAAGACCTGGG
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