DN618221

Overview
NameDN618221
Unique NameDN618221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN618221 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.108e-45
Identity = 103/209 (49.28%), Postives = 132/209 (63.16%), Query Frame = 3
Query:    6 GTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNL--KKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRG 626
            GTHT+ST AG  V  AS  G +A GTA G AP AR+A+YK CW            CF +D+LAAID AI D V+VLS+S+G      + RDG+AIGA  A++  ILV+CSAGN+GP+ SSLSN+APW+ TVGAG+LDRDF    +LG G    G ++        K+ P +YA +      +    N C+ G+L PEKVKGKIV+C RG
Sbjct:  213 GTHTSSTAAGSVVEGASLLG-YASGTARGMAPRARVAVYKVCWL---------GGCFSSDILAAIDKAIADNVNVLSMSLGGGMS-DYYRDGVAIGAFAAMERGILVSCSAGNAGPSSSSLSNVAPWITTVGAGTLDRDFPALAILGNGKNFTGVSLFKGEALPDKLLPFIYAGN----ASNATNGNLCMTGTLIPEKVKGKIVMCDRG 406          
BLAST of DN618221 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.111e-37
Identity = 85/204 (41.67%), Postives = 122/204 (59.80%), Query Frame = 3
Query:    6 GTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFAFNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLKKMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLC 617
            GTHTAST AG  V  A+ +G    GTA GG PLAR+A YK CW          + C + D+LAA DDAI DGV ++S+S+G   P  +  D IAIG+ +AV+  IL + SAGN GP   + ++L+PWL++V A ++DR FV  V +G G    G ++  ++  + +PLV   D+   G  ++ +  C   S+ P  +KGKIV+C
Sbjct:  205 GTHTASTAAGGLVSQANLYG-LGLGTARGGVPLARIAAYKVCW---------NDGCSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVSINTFD-NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC 397          
BLAST of DN618221 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.573e-36
Identity = 86/209 (41.15%), Postives = 121/209 (57.89%), Query Frame = 3
Query:    6 GTHTASTVAGRRVPNASAFGGFAEGTASGGAPLARLAIYKACWATPKASKAAGNTCFEADMLAAIDDAIRDGVHVLSISIGTNQPFA-FNRDGIAIGALNAVKHNILVACSAGNSGPAPSSLSNLAPWLITVGAGSLDRDFVGPVVLGTGMEIIGKTVTPYNLK-KMHPLVYAADVVVPGVHQNETNQCLPGSLTPEKVKGKIVLCMRG 626
            GTHT+STVAG  V NAS +G  A GTA G  P ARLA+YK CWA         + C + D+LA  + AI DGV ++SISIG   P A ++ D I++G+ +A++  IL   SAGN GP+  +++N  PW++TV A  +DR F   + LG G    G  ++ ++ K K +PLV   D       +     C   SL  +KVKGK+++C  G
Sbjct:  211 GTHTSSTVAGVLVANASLYG-IANGTARGAVPSARLAMYKVCWAR--------SGCADMDILAGFEAAIHDGVEIISISIGG--PIADYSSDSISVGSFHAMRKGILTVASAGNDGPSSGTVTNHEPWILTVAASGIDRTFKSKIDLGNGKSFSGMGISMFSPKAKSYPLVSGVDAAKNTDDKYLARYCFSDSLDRKKVKGKVMVCRMG 408          
The following BLAST results are available for this feature:
BLAST of DN618221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH1.108e-4549.28Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME1.111e-3741.67Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH3.573e-3641.15Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
back to top
Properties
Property NameValue
Genbank descriptionUCRCS11_02E10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618221 ID=DN618221; Name=DN618221; organism=Citrus sinensis; type=EST; length=627bp
ACATCGGGACTCACACGGCATCCACGGTGGCTGGTCGTCGAGTCCCAAAT
GCGTCAGCCTTTGGTGGGTTTGCAGAAGGCACTGCTTCCGGAGGAGCCCC
ACTGGCCCGGCTAGCCATCTACAAAGCGTGCTGGGCGACTCCCAAGGCGT
CCAAGGCAGCAGGGAACACATGCTTTGAGGCAGATATGCTGGCAGCCATC
GACGATGCCATTAGGGACGGTGTTCATGTATTGAGCATCTCAATTGGGAC
AAACCAACCCTTTGCTTTCAATAGAGACGGCATTGCAATTGGGGCATTAA
ATGCAGTCAAACACAACATCCTTGTCGCTTGCAGCGCAGGGAATTCGGGT
CCTGCCCCTTCTTCATTATCAAACCTAGCCCCTTGGTTGATCACAGTTGG
TGCTGGCTCCCTCGATCGTGATTTTGTTGGCCCTGTTGTGCTAGGGACTG
GCATGGAAATCATTGGAAAAACAGTCACTCCTTACAATCTAAAGAAGATG
CACCCATTAGTCTATGCAGCAGATGTTGTGGTCCCTGGAGTGCACCAGAA
TGAAACAAATCAATGCCTCCCTGGTTCTCTGACACCGGAGAAAGTAAAAG
GAAAGATAGTGCTGTGCATGAGAGGTA
back to top