DN618204

Overview
NameDN618204
Unique NameDN618204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7308 contig Csv1_Contig7308:25..612. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.565e-19
Identity = 54/152 (35.53%), Postives = 78/152 (51.32%), Query Frame = 2
Query:  170 VPPSLDPKTNVDSKDVVYSPENNLSARLYLP------------KNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHH 586
            VP + +P   V S DV+   + NL +R+Y P            +N    + +P++V+FHGG F   +A S  Y      LV     + VSV+YRRAPE+  P AY+D W  +KWV S         WL    D + ++F +GDS+G NI H+
Sbjct:   53 VPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSGGNIVHN 197          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.670e-19
Identity = 53/140 (37.86%), Postives = 78/140 (55.71%), Query Frame = 2
Query:  182 LDPKTNVDSKDVVYSPENNLS----ARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHH 586
            +D  TN+ ++  +Y P + L       L L K  +  + +P+L++FHGG F   +A S  Y  +   LV+   ++ VSVDYRR+PEH  P AY+D W+A+ WV S V       WL    D    V+ +GDS+G NIAH+
Sbjct:   69 VDSTTNLLTR--IYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHN 199          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.769e-19
Identity = 55/154 (35.71%), Postives = 77/154 (50.00%), Query Frame = 2
Query:  170 VPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQK--------------LPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHH 586
            V  + +P   V S DV+     NL +R+Y P   +Q Q               +P++++FHGG F   +A S  Y      LV     + VSV+YRRAPE+P P AY+D W A+ WV S         WL    D +  +F +GDS+G NIAH+
Sbjct:   53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGDSSGGNIAHN 199          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.567e-17
Identity = 57/176 (32.39%), Postives = 80/176 (45.45%), Query Frame = 2
Query:  134 DGKVERLRGTDI---VPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQK---------------------LPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFE-QVFYSGDSAGANIAHH 586
            DG  ER  G  +   VP +  P   V S D +      L  R+Y        ++                      P++++FHGG F   +A S  Y +     V  +  + VSV+YRRAPEH  P AY+D W A+KWV S       + ++    D + +VF SGDS+G NIAHH
Sbjct:   38 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHH 206          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.516e-14
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  188 PKTNVDSKDVVYSPENNLSARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNR-NADFEQVFYSGDSAGANIA 580
            P T+ ++  V  +  NN+  R+Y+PK  ++  +  L  Y HGGG+C+ +A    Y           +++ VS +YR APE+  PI +ED +DA+KW          +D L +   D E+V  SGDSAG N+A
Sbjct:   71 PPTSDENVTVTETTFNNVPVRVYVPKRKSKTLRRGLF-YIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLR-------QDVLEKYGVDPERVGVSGDSAGGNLA 194          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: LIP2_MORS1 (Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.043e-12
Identity = 41/127 (32.28%), Postives = 62/127 (48.82%), Query Frame = 2
Query:  209 KDVVYSPENNLSARLYLPKNTNQNQKLP---LLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFEQVFYSGDSAGANIA 580
            K +  +   +++ R Y     N  +K      +++FHGGGFCI      T+H + + + ++     VSVDYR APE+P P A +D   A  W+A H    G        A   ++  SGDSAG  +A
Sbjct:  129 KTIANADGGDMTVRCYQKSTQNSERKSTDEAAMLFFHGGGFCIGDI--DTHHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLAEHSQSLG--------ASPSRIVLSGDSAGGCLA 245          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.201e-11
Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 2
Query:  113 PLIKVHKDGKVERLRGTDIVPPSLDPKTNVDSKDVVYSPENNLSA------RLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFEQVFYSGDSAGANIA 580
            P++K H    V+ LR    V P       V+S + +  P  +  A      R++ P  T      P  ++FHGGG+ +      T +++   +  +A  + V+VDYR APE P P   +D W+A+ +   + D  G    +N N    ++   G SAG NIA
Sbjct:   37 PIVKTHTY-PVDFLRNNGNVMPGQSELLPVESTEDITIPRKHTKAPSGVPSRIFRPHGTAPEGGWPCFLWFHGGGWVLGNI--NTENSFATHMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYCYENADTLG----INPN----KIAVGGSSAGGNIA 187          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: AAAD_HUMAN (Arylacetamide deacetylase OS=Homo sapiens GN=AADAC PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11
Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 2
Query:  164 DIVPPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSEANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFEQVFYSGDSAGANIA 580
            D VPP+ D    V          NN+  R+Y+PK  ++  +  L  Y HGGG+C+ +A    Y           + + VS +YR AP++  PI +ED ++A++W          +       + E++  SGDSAG N+A
Sbjct:   69 DEVPPTSDENVTVTETKF-----NNILVRVYVPKRKSEALRRGLF-YIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRWFLR------KKVLAKYGVNPERIGISGDSAGGNLA 195          
BLAST of DN618204 vs. ExPASy Swiss-Prot
Match: AAAD_BOVIN (Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.787e-11
Identity = 44/141 (31.21%), Postives = 75/141 (53.19%), Query Frame = 2
Query:  173 PPSLDPKTNVDSKDVVYSPENNLSARLYLPKNTNQNQKLPLLVYFHGGGFCIETAFSPTYHNYLNDLVSE-----ANIIAVSVDYRRAPEHPLPIAYEDSWDAVKWVASHVDGSGPEDWLNRNADFEQVFYSGDSAGANIA 580
            PP+ D   N+  KD  +   N++  R+Y+P+   ++ +  L  Y HGGG+C     S  Y++Y  DL+S       + + +S +YR AP++  P+ +ED + A+KW         P++  +   D  ++  SGDSAG N+A
Sbjct:   72 PPTSDE--NIIVKDTTF---NDIPVRIYVPQQKTKSLRRGLF-YIHGGGWCFG---SNDYYSY--DLLSRWTAERLDAVVISTNYRLAPKYHFPVQFEDVYTALKWFLD------PQNLESYGVDPGRIGISGDSAGGNLA 195          
The following BLAST results are available for this feature:
BLAST of DN618204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
GI1L3_ARATH1.565e-1935.53Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L2_ARATH2.670e-1937.86Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GI1L1_ARATH7.769e-1935.71Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GID1_ORYSJ5.567e-1732.39Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
AAAD_RABIT1.516e-1434.85Arylacetamide deacetylase OS=Oryctolagus cuniculus... [more]
LIP2_MORS17.043e-1232.28Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 P... [more]
YFZ3_SCHPO1.201e-1129.01AB hydrolase superfamily protein C1039.03 OS=Schiz... [more]
AAAD_HUMAN4.565e-1130.22Arylacetamide deacetylase OS=Homo sapiens GN=AADAC... [more]
AAAD_BOVIN7.787e-1131.21Arylacetamide deacetylase OS=Bos taurus GN=AADAC P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02E01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618204 ID=DN618204; Name=DN618204; organism=Citrus sinensis; type=EST; length=588bp
CAAATCCTTTCGTTATCATCTTTACAAAAGCAAACGCCCTCCACATTTTG
TGCTCTGCTTCTTCTCCATGGATTCCGCCAACGCATCATCAGAAGTCGCC
CATGACTTCTCTCCTTTGATAAAAGTACACAAAGACGGCAAAGTAGAAAG
GCTTAGGGGCACCGATATCGTTCCCCCATCACTTGATCCCAAAACAAACG
TTGATTCCAAAGACGTTGTGTATTCTCCTGAAAATAATTTATCTGCTCGG
CTTTACCTCCCGAAAAACACAAATCAAAACCAAAAACTTCCCCTTCTTGT
TTATTTTCACGGCGGAGGTTTTTGCATCGAGACTGCTTTTTCACCAACTT
ACCATAATTACCTCAACGACTTGGTCTCTGAAGCTAACATCATCGCAGTC
TCGGTCGACTACCGAAGAGCCCCAGAGCATCCCCTTCCTATCGCTTATGA
AGATTCATGGGACGCAGTCAAATGGGTTGCTTCCCATGTTGACGGAAGTG
GCCCCGAAGATTGGCTCAACCGTAATGCTGATTTTGAGCAAGTGTTTTAC
TCTGGGGACAGCGCTGGTGCTAATATTGCTCATCACAT
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