DN618197

Overview
NameDN618197
Unique NameDN618197
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11399 contig Csv1_Contig11399:696..1251. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.994e-74
Identity = 137/158 (86.71%), Postives = 148/158 (93.67%), Query Frame = -2
Query:   82 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 555
            GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRLKSIGMI+ VPGMKALDMN+AEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LGQPNA+DGT+  V  V PE +LAA +++E  DA
Sbjct:  201 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTY--VGGVHPELILAAADSAETADA 356          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 1.688e-73
Identity = 136/158 (86.08%), Postives = 147/158 (93.04%), Query Frame = -2
Query:   82 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 555
            GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVK L+SIGMID+VPGMKALDMN AEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG PNA+DG++  V  + PE +LAA +++EI DA
Sbjct:  197 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSY--VGGIHPELILAAADSAEIADA 352          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.063e-71
Identity = 136/158 (86.08%), Postives = 142/158 (89.87%), Query Frame = -2
Query:   82 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 555
            G RVGGVVTNWALV+ NH TQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMID VPGMKALDMNTAEDAIVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA  LALKALG PNAIDGT   V  + PE VLAA +++E VDA
Sbjct:  194 GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL--VGNLSPELVLAAADSAETVDA 349          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.063e-71
Identity = 131/157 (83.44%), Postives = 143/157 (91.08%), Query Frame = -2
Query:   82 GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 552
            GRVGGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI +VPGMKALDMN AED IVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG+PNA+DGT  EV+    E  + A+++ E+VDA
Sbjct:  198 GRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKDDEVVDA 354          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.337e-70
Identity = 132/158 (83.54%), Postives = 143/158 (90.51%), Query Frame = -2
Query:   82 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDGTFSEVTEVQPEFVLAATENSEIVDA 555
            GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI +VPGMKALDMNTAED IVRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG+PNA+DGT S       E ++ A ++ E+VDA
Sbjct:  200 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLR---EELMIAYKDDEVVDA 354          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 9.988e-42
Identity = 82/125 (65.60%), Postives = 100/125 (80.00%), Query Frame = -2
Query:  181 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 555
            G R+ GVVTNW LVSM+HD QSCMDPN + A +V+S+ GHD P GA  VKRL S+G I+ + GM+ LDMN AEDAIV+ TREIVPG+IV GME++E+DGA RMGPTFGAM++SG KAA  ALK +
Sbjct:  191 GVRISGVVTNWTLVSMHHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 8.455e-41
Identity = 81/123 (65.85%), Postives = 98/123 (79.67%), Query Frame = -2
Query:  187 GGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 555
            G R+ GVVTNW LVSM+HD QSCMDPN + A +++S+ GHDGP GA  VKRL S+  I+ + GM+ LDMN AEDAIV+ TREIVPG+IV GME++E+DGA RMGPTFGAM +SG KAA  ALK
Sbjct:  187 GVRIAGVVTNWTLVSMHHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.763e-38
Identity = 78/130 (60.00%), Postives = 95/130 (73.08%), Query Frame = -2
Query:  160 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAID 549
            R+ GVVTNW LVS+NH  QSCMDPN + A +VVS+ GHDGPFGA  VKRL S  ++ ++  M+ LDMN AED IV+ TRE+ PGMIV GME++E DGA RMGPTFG MM SG KAA  AL    +  A++
Sbjct:  195 RIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEALAIFDERKAVN 324          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 3.007e-38
Identity = 72/125 (57.60%), Postives = 96/125 (76.80%), Query Frame = -2
Query:  175 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQ 549
            ++ GVV NW LV+++HD  SCMDPN + A +++S+ GHDGPFGA   KRL S+G +D + GM+ LDMN+AEDAIV+ TRE+  G+I+ GME++EIDG  RMGPTFGAM++SG KAA  ALK   +
Sbjct:  196 QIAGVVVNWTLVTLHHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALKVFDE 320          
BLAST of DN618197 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.671e-37
Identity = 73/131 (55.73%), Postives = 97/131 (74.05%), Query Frame = -2
Query:  157 RVGGVVTNWALVSMNHDTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDSVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGQPNAIDG 549
            R+ G VTNW LVS+NHD QSCMDP+ + A +V S  GHDGPFGA  VKR+ S G+ + +  M+ LDM  AED I   TREI+PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L +    +G
Sbjct:  201 RIAGCVTNWTLVSLNHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEG 331          
The following BLAST results are available for this feature:
BLAST of DN618197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
THI4_CITSI1.994e-7486.71Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL1.688e-7386.08Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH2.063e-7186.08Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI42_MAIZE2.063e-7183.44Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI41_MAIZE1.337e-7083.54Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI4_FUSSH9.988e-4265.60Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSOX8.455e-4165.85Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI2_SCHPO1.763e-3860.00Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_ASPOR3.007e-3857.60Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_UROFA5.671e-3755.73Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D22_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618197 ID=DN618197; Name=DN618197; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTTTTGGGTTTATTGTTGATTTTGAATTCTCATCAAAA
TGTACATAATTCTCAGATTTTATAATTTTTAAGCATCAACAATCTCGCTG
TTCTCAGTGGCCGCAAGGACAAACTCTGGCTGTACTTCCGTAACTTCACT
GAATGTCCCATCTATCGCATTCGGCTGCCCCAATGCCTTCAACGCCAAAT
GGGCTGCCTTCTGCCCTGAAATCATCATGGCCCCGAATGTAGGTCCCATT
CTAGGGGCACCGTCGATCTCTGCGACTTCCATGCCCGTGACAATCATGCC
AGGCACGATCTCCCTGGTAAGCCTAACGATAGCATCCTCTGCAGTGTTCA
TATCGAGAGCTTTCATTCCGGGGACGGAGTCAATCATGCCAATACTCTTA
AGCCTCTTAACACCGGTAGCCCCAAAAGGGCCGTCATGGCCACACGAGCT
GACCACAATCTTGGCCTCCATCACATTGGGGTCCATGCAAGACTGTGTGT
CGTGATTCATAGACACCAAGGCCCAGTTTGTGACGACGCCACCTACTCTC
CCTCCC
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