DN618180

Overview
NameDN618180
Unique NameDN618180
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length573
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig826 contig Csv1_Contig826:518..1090. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 209.149 bits (531), Expect = 1.213e-53
Identity = 93/131 (70.99%), Postives = 114/131 (87.02%), Query Frame = -3
Query:  179 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 571
            NQRS+EGTRDTEIAMGAYQP+HTWA K S P GQ+YGYRMSLWAEH+  +++CF +PES+ CVR+VR++ E+NWKQ+AA+EV+ ++GHLLKYPV+VD  GKV  LPG   FPDVGGNI+G+FIAIQENLTI
Sbjct:  837 NQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGTFIAIQENLTI 967          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.070e-53
Identity = 93/131 (70.99%), Postives = 113/131 (86.26%), Query Frame = -3
Query:  179 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 571
            NQRSLEGTRDTEIAMG YQP ++WA K S P+GQ++GYRMSLWAEH+G +E+ F  PE++ CVRRVR LSE NW+QYAA+EVT++ GHLLKYPV VD TGKV++LPGC  FPD+GG I+GSF+A+QENLTI
Sbjct:  728 NQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSELNWRQYAAEEVTEMSGHLLKYPVQVDRTGKVSSLPGCETFPDLGGKIIGSFLALQENLTI 858          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.703e-53
Identity = 89/131 (67.94%), Postives = 116/131 (88.55%), Query Frame = -3
Query:  179 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 571
            NQRS+EGTRDTEIAMGAYQP+HTWA + S P GQ+YGYRMSLWAEH+  +++CF  PESLGCVR+VR+++E+NW+Q+ ++EV++++GHL+KYPV+VD  GKV  LPG  +FPDVGGN++GSF+AIQENLTI
Sbjct:  785 NQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAEENWEQFRSEEVSEMRGHLMKYPVEVDRKGKVRPLPGSEEFPDVGGNVVGSFLAIQENLTI 915          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 206.453 bits (524), Expect = 7.864e-53
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = -3
Query:  179 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 571
            NQRSLEGTRDTEIAMG YQP H+WA K S P GQ++GYRMSLWAEH+G +E+ F  PE++ CVRRVR LSE NW QYAA+EVT++ GHLLKYPV VD TGKV++LPGC  FPD+GG I+GSF+ +QENLTI
Sbjct:  726 NQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWGQYAAEEVTEMSGHLLKYPVQVDKTGKVSSLPGCETFPDLGGKIIGSFLTLQENLTI 856          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.483e-51
Identity = 91/131 (69.47%), Postives = 110/131 (83.97%), Query Frame = -3
Query:  179 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSFIAIQENLTI 571
            NQRSLEGTRDTEIAMG YQP H+WA K S P GQ++GYRMSLWAEH+G +E+ F  PE++ CVRRVR LSE NW+QYAA+EVT++ GHLLKYPV VD TGKV++LPG   FPD+GG I+GSF+ ++ENLTI
Sbjct:  736 NQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSELNWRQYAAEEVTEMPGHLLKYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVVEENLTI 866          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.102e-38
Identity = 73/131 (55.73%), Postives = 98/131 (74.81%), Query Frame = -3
Query:  182 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGSF-IAIQENLT 571
            NQRS+ GT+DTEIAMGAYQP HTWA K  +P GQVYGYRMSLWAEH+G   + F  P  L C+++V ++SE+NWK++   + ++L+GHL+KYP+ VD  GKV+ LP    FPDVGG I+G+  +A+ + LT
Sbjct:  737 NQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.596e-29
Identity = 60/122 (49.18%), Postives = 84/122 (68.85%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ-LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMGAYQP H    + +   GQ++G+RMSLW EH+G +E+ F RPES+ CV++V  ++E+ W  Y++D++ Q L GHLL YP+ V   G V  LPG   FPD    +LG+
Sbjct:  682 NQRSMDGARDSEIAMGAYQPYHLATRQPAR--GQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAEKYWDLYSSDDLEQDLPGHLLSYPIGVTADGSVTELPGMENFPDTRARVLGN 801          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.764e-28
Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVTQ-LKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMG YQP H    + +   GQ++G+RM+LW EH+G +++ F RPESL CV++V  ++E+ W  Y++D++ Q L GHLL YP+ V   G V  LPG   FPD    +LG+
Sbjct:  682 NQRSMDGARDSEIAMGGYQPYHLATRQPAR--GQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAEKYWDMYSSDDLQQDLPGHLLSYPIGVASDGVVTELPGMEYFPDTRARVLGA 801          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.548e-27
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMGAYQP H   S      GQ++G+RMSLW EH+G ++E F  PES  CVR+V  ++E+ W  Y+++ +   L GHLL+YP+ V   G V  LPG   FPD    +LG+
Sbjct:  678 NQRSMDGARDSEIAMGAYQPHHL--STRQPARGQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKARVLGA 797          
BLAST of DN618180 vs. ExPASy Swiss-Prot
Match: PLDA1_BRAOC (Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.345e-27
Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = -3
Query:  209 NQRSLEGTRDTEIAMGAYQPRHTWASKLSNPYGQVYGYRMSLWAEHIGAIEECFNRPESLGCVRRVRSLSEQNWKQYAADEVT-QLKGHLLKYPVDVDPTGKVNALPGCAQFPDVGGNILGS 571
            NQRS++G RD+EIAMG YQP H   S      GQ++G+RMSLW EH+G ++E F  P S+ C+ +V  +S++ W  Y+++ +   L GHLL+YPVDVD  G V   PG   FPD    ILG+
Sbjct:  680 NQRSMDGARDSEIAMGGYQPHHL--SHRQPARGQIHGFRMSLWYEHLGMLDETFLDPSSVECIEKVNRISDKYWDLYSSESLEHDLPGHLLRYPVDVDGEGDVTEFPGFEFFPDTKARILGT 799          
The following BLAST results are available for this feature:
BLAST of DN618180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PLDB1_ARATH1.213e-5370.99Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH2.070e-5370.99Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDB2_ARATH2.703e-5367.94Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG2_ARATH7.864e-5370.99Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH1.483e-5169.47Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH1.102e-3855.73Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_MAIZE1.596e-2949.18Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_ORYSJ1.764e-2847.54Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA1_RICCO2.548e-2748.36Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]
PLDA1_BRAOC4.345e-2747.54Phospholipase D alpha 1 OS=Brassica oleracea var. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02D13_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618180 ID=DN618180; Name=DN618180; organism=Citrus sinensis; type=EST; length=573bp
TTTTTTTTTTTTTTTTTGGATCGACATTGATCAAATTATTATTTTCCTTT
TCGAATGTTTATTAAATAACAAATGTATTTGATATTCATGGTCTGAAATT
TTCCGGAATATATCTTACAGTTGATGACATTTTGGCACAAAAATAACGAG
GCAATTTGGCACAAGCAAGATTCATTCAAATGGTGAGATTTTCTTGAATG
GCTATAAATGAACCCAATATGTTGCCACCCACATCTGGAAATTGTGCACA
TCCAGGAAGAGCGTTAACCTTGCCCGTTGGATCAACATCAACTGGATACT
TAAGCAGGTGACCCTTCAATTGTGTTACCTCATCGGCTGCATACTGTTTC
CAATTCTGTTCACTCAGTGACCTTACTCTTCTTACACATCCTAGACTCTC
CGGTCTGTTAAAACATTCCTCAATGGCTCCAATGTGCTCTGCCCATAATG
ACATTCTGTAACCATACACTTGCCCATAAGGATTGGAGAGTTTGCTCGCC
CAGGTGTGGCGTGGCTGATATGCCCCCATTGCTATTTCGGTGTCTCTGGT
GCCTTCCAGGGAACGTTGATTGA
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