DN618174

Overview
NameDN618174
Unique NameDN618174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10157 contig Csv1_Contig10157:284..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN618174 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.274e-12
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 2 
Query:  314 SSFQSLCAQLWRCVTRARKLASGKTTTFRMAVNCRHRLEPRLSPYYFGNLIQSIPTVASVGELLSHDLGWGAERLHKNVVAHDNDTVRRGVADW 595
            S+FQSL + +WR VT AR L     T F +  +CR R++P +   YFGNLIQ+I T  + G L +H   +GA  + K + AHD   +     +W
Sbjct:  270 STFQSLTSHIWRHVTLARGLKPEDITIFTVFADCRRRVDPPMPEEYFGNLIQAIFTGTAAGLLAAHGPEFGASVIQKAIAAHDASVIDARNDEW 363
The following BLAST results are available for this feature:
BLAST of DN618174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DCR_ARATH3.274e-1239.36BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02D09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618174 ID=DN618174; Name=DN618174; organism=Citrus sinensis; type=EST; length=596bp
GAAAGTTCCCGACTTCTCCCGCGACACCGTTTTTGACTCGCCGGCGGTGC
TCAAGTTCCCCGCCGGTGGCCCCGCTGTTACTTTCTCCGGCGCGGTGCCG
TTGCGTGAGAGAATCTTCCATTTCAGCAGGGAGGCTATTTTGAGGATGAA
GTTCAGGGCTAATAAGGGAATTTTAAAAAGTGATTACTACAAGTCAGTAA
ATAACGAGATTATAGGCAAGCAAAGTAACGACAGTTGGAAAACGGTTAAC
GGAGAGATAACGTCCCTTTTTGAGACGCTGTTAAAAACCAACACAAATCG
GACGGACGAGATTTCTTCTTTCCAGTCACTGTGCGCCCAGCTATGGCGGT
GCGTGACACGTGCGAGGAAACTCGCGTCTGGCAAAACGACGACGTTTCGC
ATGGCTGTGAACTGTCGCCACAGGCTCGAGCCGCGGCTCAGTCCGTACTA
CTTTGGTAACCTGATACAGAGCATCCCGACCGTTGCCTCAGTGGGGGAAC
TGTTGTCCCACGATCTGGGTTGGGGAGCCGAGCGGCTTCACAAGAACGTG
GTGGCACACGATAATGATACGGTGCGACGCGGTGTAGCGGACTGGG
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