DN618164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TPPC2_BOVIN (Trafficking protein particle complex subunit 2 OS=Bos taurus GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.297e-32 Identity = 65/132 (49.24%), Postives = 93/132 (70.45%), Query Frame = -3 Query: 214 FIIVSRNEIPIYEAE---VGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 600 F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 7 FVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TPPC2_PONAB (Trafficking protein particle complex subunit 2 OS=Pongo abelii GN=TRAPPC2 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32 Identity = 65/132 (49.24%), Postives = 93/132 (70.45%), Query Frame = -3 Query: 214 FIIVSRNEIPIYEAE---VGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 600 F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 7 FVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TPPC2_MOUSE (Trafficking protein particle complex subunit 2 OS=Mus musculus GN=Trappc2 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32 Identity = 65/132 (49.24%), Postives = 93/132 (70.45%), Query Frame = -3 Query: 214 FIIVSRNEIPIYEAEV---GSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 600 F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 7 FVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDVRQEDGIKNFFTDVYDLYIKFAMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TPPC2_HUMAN (Trafficking protein particle complex subunit 2 OS=Homo sapiens GN=TRAPPC2 PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 3.000e-32 Identity = 65/132 (49.24%), Postives = 93/132 (70.45%), Query Frame = -3 Query: 214 FIIVSRNEIPIYEAE---VGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 600 F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+LK +D+FN+ VS +VTAGH RF++LHD R +DGIK+FF +V++LYIK +NP Y P S I SS FD KV+ L +K+L Sbjct: 7 FVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSPIRSSAFDRKVQFLGKKHL 138
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TRS20_SCHPO (Transport protein particle 20 kDa subunit OS=Schizosaccharomyces pombe GN=trs20 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.332e-31 Identity = 64/135 (47.41%), Postives = 94/135 (69.63%), Query Frame = -3 Query: 214 TACFIIVSRNEIPIYEAEVGSAAKREDAA---QLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 609 TA I+ + P+YE E+G ++ D + L+QFI+H++LDIV L WT++A ++K ID+F+++ +S YVT + RFMLLH +++ D IK FFQE+HELYIK L++P Y P I S FD KVR++AR+YL Sbjct: 2 TAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMKTIDQFHEMYISAYVTPSNMRFMLLHQNQSADNIKLFFQELHELYIKTLMSPFYQPNQPIRSQAFDLKVRSIARRYL 136
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TPPC2_DICDI (Trafficking protein particle complex subunit 2 OS=Dictyostelium discoideum GN=trappc2 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.808e-30 Identity = 61/132 (46.21%), Postives = 93/132 (70.45%), Query Frame = -3 Query: 217 TTACFIIVSRNEIPIYEAEVGSAAKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSRNDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKY 612 +T F+I+ +N+ P+YE E ++++ L Q+I H +LDIV++ W ++ M+LK ID+FN + +S +VTAGH +F+LLH+ +++D IK+FF EVH+LY+KILLNP Y ITS+ FD KVR + KY Sbjct: 2 STFTFLIIGKNDNPLYEIEFPITVQKKETYVL-QYIAHGSLDIVEEHVWKSNNMYLKIIDKFNKVQISSFVTAGHIKFLLLHEKKDEDAIKNFFVEVHDLYLKILLNPFYEYNKPITSTAFDAKVRKIGTKY 132
BLAST of DN618164 vs. ExPASy Swiss-Prot
Match: TRS20_YEAST (Transport protein particle 20 kDa subunit OS=Saccharomyces cerevisiae GN=TRS20 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.803e-19 Identity = 55/169 (32.54%), Postives = 86/169 (50.89%), Query Frame = -3 Query: 214 FIIVSRNEIPIYEAEVGSAAKRE----DAAQLHQFILHAALDIVQDLAW-----------------------------TTSAMFLKAIDRFNDLVVSVYVTAGHTRFMLLHDSR-------NDDGIKSFFQEVHELYIKILLNPLYLPGSRITSSHFDTKVRALARKYL 600 F I+ + + P+YE E +A + D +L+ FILHA+LDIV+DL W T +L +D F L ++ Y++ +F+++H + +D+ ++SF+QEVHELY+K L+NP Y I S FD++VR LARK+L Sbjct: 5 FAIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVEDLQWQINPTSQLNGNGGNGSNGGGGFLRSRAVNNTDNCYLGKVDHFYGLAITAYISYSGMKFVMIHGNSANSSVVIDDNNMRSFYQEVHELYVKTLMNPFYKITDPIRSPAFDSRVRTLARKHL 173 The following BLAST results are available for this feature:
BLAST of DN618164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618164 ID=DN618164; Name=DN618164; organism=Citrus sinensis; type=EST; length=614bpback to top |