DN618155

Overview
NameDN618155
Unique NameDN618155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10919 contig Csv1_Contig10919:12..572. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 320.857 bits (821), Expect = 2.682e-87
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 2.682e-87
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 320.857 bits (821), Expect = 2.682e-87
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 5.976e-87
Identity = 158/161 (98.14%), Postives = 161/161 (100.00%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGL+SLRQRHWYIQSTCAT
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 318.931 bits (816), Expect = 1.019e-86
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 1.331e-86
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEI DKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIIDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 318.161 bits (814), Expect = 1.739e-86
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 313.153 bits (801), Expect = 5.593e-85
Identity = 154/161 (95.65%), Postives = 158/161 (98.14%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL+FTKL  RLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRV EARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 312.768 bits (800), Expect = 7.305e-85
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL FTK  SRLF KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLRFTKALSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 161
[Close]
BLAST of DN618155 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 1.246e-84
Identity = 154/161 (95.65%), Postives = 159/161 (98.76%), Query Frame = 3 
Query:   75 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANEQDLPNAVNAAEITDKLGLHSLRQRHWYIQSTCAT 557
            MGL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILY+LKLGEIVTTIPTIGFNVETVEY+ ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFAN+QDLPNA+NAAEITDK GLHSLRQRHWYIQSTCAT
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCAT 161
The following BLAST results are available for this feature:
BLAST of DN618155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARF_VIGUN2.682e-8798.14ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF2_ORYSJ2.682e-8798.14ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ2.682e-8798.14ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF_MAIZE5.976e-8798.14ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF2_ARATH1.019e-8697.52ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_DAUCA1.331e-8697.52ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF1_ARATH1.739e-8697.52ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_SALBA5.593e-8595.65ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF1_CHLRE7.305e-8595.65ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF1_CATRO1.246e-8495.65ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C23_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618155 ID=DN618155; Name=DN618155; organism=Citrus sinensis; type=EST; length=559bp
CGACAAAGCTCTTTCTCTTGACTTGACCATCAACGGCAAAATCTAAATCC
ATCACAAGTTAATTAACAACAGAGATGGGATTGACGTTCACGAAGTTGTT
TAGTCGGTTATTTGCGAAGAAGGAGATGCGAATTCTAATGGTGGGTCTCG
ACGCCGCCGGTAAGACCACTATTTTGTACAAGCTTAAGCTCGGTGAGATC
GTCACCACCATCCCTACAATCGGTTTTAATGTGGAGACGGTTGAATACAA
GAACATTAGCTTCACGGTTTGGGATGTCGGAGGTCAGGACAAGATCCGTC
CATTGTGGAGGCACTATTTTCAGAACACTCAGGGCCTCATTTTTGTGGTG
GATAGCAATGACAGGGATAGAGTAGTTGAGGCAAGGGATGAGTTGCACCG
AATGTTGAATGAGGATGAATTGAGGGATGCTGTTCTGCTTGTATTTGCTA
ACGAACAAGATCTTCCGAATGCAGTGAATGCTGCAGAGATAACTGACAAG
CTCGGTCTTCATTCTCTTCGCCAGCGACACTGGTATATCCAGAGCACATG
TGCAACCTC
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