DN618143

Overview
NameDN618143
Unique NameDN618143
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8708 contig Csv1_Contig8708:7..523. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP14_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.525e-54
Identity = 100/117 (85.47%), Postives = 108/117 (92.31%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            +D   LDDII RLTEVR ARPGKQVQLSE+EIKQLC  +RDIF++QPNLLELEAP+KICGD+HGQYSDLLRLFEYGG+PP ANYLFLGDYVDRGKQSLETICLLLAYKIKYP NFFL
Sbjct:   14 IDSAVLDDIIRRLTEVRLARPGKQVQLSEAEIKQLCTTARDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPSANYLFLGDYVDRGKQSLETICLLLAYKIKYPGNFFL 130          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 3.297e-54
Identity = 101/117 (86.32%), Postives = 108/117 (92.31%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MD   LDDII RL EVR ARPGKQVQLSESEI+QLC  SR+IF+ QPNLLELEAP+KICGD+HGQYSDLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:   15 MDAVLLDDIIRRLLEVRTARPGKQVQLSESEIRQLCTVSREIFLSQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 131          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.646e-53
Identity = 96/117 (82.05%), Postives = 108/117 (92.31%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MDP  LDD+I RL EV+  +PGK  QLSESEIKQLC A+++IF++QPNLLELEAP+KICGDVHGQYSDLLRLF+YGGYPP+ANYLFLGDYVDRGKQSLETICLLLAYK+KYPENFFL
Sbjct:    1 MDPALLDDVIRRLLEVKNLKPGKNAQLSESEIKQLCAAAKEIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFDYGGYPPQANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFL 117          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.000e-51
Identity = 96/118 (81.36%), Postives = 107/118 (90.68%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPG-KQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MDP ALDDII RL + R  +PG KQ  L+ESEI+QLC+ SR+IF++QPNLLELEAP+KICGD+HGQYSDLLRLFEYGG+PP ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:    9 MDPAALDDIIRRLLDYRNPKPGTKQAMLNESEIRQLCIVSREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 126          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 3.412e-51
Identity = 96/119 (80.67%), Postives = 106/119 (89.08%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPG--KQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            M+P  LDDII RL E R  RPG  KQV LSE EI+QLC  S++IF++QPNLLELEAP+KICGD+HGQYSDLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:   15 MEPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 133          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP12_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 7.602e-51
Identity = 90/117 (76.92%), Postives = 108/117 (92.31%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            M+ +A+DD+I RL EVR  RPGKQV L+E EI+QLC+ ++D+FM QPNLLELEAP+KICGD+HGQY+DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLA+K+KYP+NFFL
Sbjct:    1 MEESAVDDVIERLLEVRNNRPGKQVNLAEGEIRQLCLTAKDVFMSQPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKVKYPKNFFL 117          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.297e-50
Identity = 96/117 (82.05%), Postives = 106/117 (90.60%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MD  A+D II +L EVR + PGK VQLSESEIKQLCVASRDIF++QPNLLE EAP+K  GD+HGQYSDLLRLFEYGG+PP+ANYLFLGDYVDRG+QSLETICLLLAYKIKYPENFFL
Sbjct:    1 MDTAAVDRIIEKLIEVRSSNPGKLVQLSESEIKQLCVASRDIFLKQPNLLESEAPIKTRGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGRQSLETICLLLAYKIKYPENFFL 117          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 2.212e-50
Identity = 93/117 (79.49%), Postives = 106/117 (90.60%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            ++P  LDDII+RL E R AR  +QVQLSE+EI+ LC AS++IF+ QPNLLELEAP+KICGD+HGQY DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL
Sbjct:    8 IEPAVLDDIINRLLEFRNARTVRQVQLSEAEIRSLCTASKEIFLHQPNLLELEAPIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 124          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP17_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 7 OS=Arabidopsis thaliana GN=TOPP7 PE=2 SV=3)

HSP 1 Score: 197.593 bits (501), Expect = 2.889e-50
Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MDP  L+ +I+RL E R  +PGK VQLSE+EIKQLC  SRDIF+RQPNLLELEAP+KICGD+HGQY DLLRLFE+GGYPP +NYLFLGDYVDRGKQSLETICLLLAYKIK+PENFFL
Sbjct:    1 MDPGTLNSVINRLLEAR-EKPGKIVQLSETEIKQLCFVSRDIFLRQPNLLELEAPVKICGDIHGQYPDLLRLFEHGGYPPNSNYLFLGDYVDRGKQSLETICLLLAYKIKFPENFFL 116          
BLAST of DN618143 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.773e-50
Identity = 91/117 (77.78%), Postives = 106/117 (90.60%), Query Frame = 2
Query:  167 MDPNALDDIIHRLTEVRFARPGKQVQLSESEIKQLCVASRDIFMRQPNLLELEAPMKICGDVHGQYSDLLRLFEYGGYPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 517
            MD + +DD+I RL EVR  RPGKQVQL+ESEI+ LC+ S++I   QPNLLELEAP+KICGD+HGQY+DLLRLFEYGG+PP+ANYLFLGDYVDRGKQSLETICLLLA+KIKYPENFF+
Sbjct:    1 MDESTVDDVIERLLEVRNNRPGKQVQLTESEIRLLCLTSKEILSEQPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKIKYPENFFI 117          
The following BLAST results are available for this feature:
BLAST of DN618143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
PP14_ARATH2.525e-5485.47Serine/threonine-protein phosphatase PP1 isozyme 4... [more]
PP1_ORYSJ3.297e-5486.32Serine/threonine-protein phosphatase PP1 OS=Oryza ... [more]
PP1_MAIZE3.646e-5382.05Serine/threonine-protein phosphatase PP1 OS=Zea ma... [more]
PP12_ARATH2.000e-5181.36Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP11_ARATH3.412e-5180.67Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP12_ACECL7.602e-5176.92Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP13_TOBAC1.297e-5082.05Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP12_TOBAC2.212e-5079.49Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP17_ARATH2.889e-5080.34Serine/threonine-protein phosphatase PP1 isozyme 7... [more]
PP11_ACECL3.773e-5077.78Serine/threonine-protein phosphatase PP1 isozyme 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618143 ID=DN618143; Name=DN618143; organism=Citrus sinensis; type=EST; length=517bp
GAAAACGTACACAAACAGAACAAGAAGACCGAAAGCTAACAAAAACTGAA
ACTCTCTCTGATTCTCTCCTTGTGTGTGAGATCATCTTTGATTTTTTAAT
CAATCAAAGCCATTGAAAACCAACTATCAAATGGCAACAACACAAGGGCA
GCAGCAGGGTACCATCATGGACCCGAATGCACTGGATGACATAATCCACC
GGCTTACGGAGGTTCGATTCGCCCGACCCGGCAAGCAAGTCCAGCTTTCT
GAGTCTGAGATCAAGCAGCTTTGTGTTGCCTCCAGGGACATCTTCATGAG
ACAACCTAATTTGCTCGAACTTGAAGCCCCCATGAAAATTTGTGGTGATG
TACATGGACAATATAGTGATTTATTGAGGCTTTTCGAATACGGAGGTTAT
CCTCCTAAAGCCAATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAA
GCAGAGTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATC
CAGAGAACTTTTTTCTT
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