DN618142

Overview
NameDN618142
Unique NameDN618142
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10309 contig Csv1_Contig10309:289..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618142 vs. ExPASy Swiss-Prot
Match: FHIT_BOVIN (Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 39/80 (48.75%), Postives = 50/80 (62.50%), Query Frame = -1
Query:  340 GTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYR 576
            GT +E + + +SL F++QDGP+AGQTV HVH+HI+PRKA     ND   D  EK  + D D     R+ EEMA EA   R
Sbjct:   66 GTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHRNDSIYDALEKHDREDKDSPALWRSEEEMAAEAAALR 145          
BLAST of DN618142 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = -1
Query:  331 LESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYRSLL 567
            LE +H  +S    +QDG  AGQTVPHVHIHI+PR+A    +N+  + +    K   + + K R+ E+MA+EA  YR+L+
Sbjct:  365 LEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGDNEIYQKLASHDK---EPERKPRSNEQMAEEAVVYRNLM 440          
BLAST of DN618142 vs. ExPASy Swiss-Prot
Match: FHIT_RAT (Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegicus GN=Fhit PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11
Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = -1
Query:  337 GTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYRS 576
            GT +E + + +S+ F++QDGP+AGQTV HVH+HI+PRK+     ND   D  +K  + + D     R+ EEMA EA+  R+
Sbjct:   66 GTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPRKSGDFRRNDNIYDELQKHDREEEDSPAFWRSEEEMAAEAEVLRA 146          
BLAST of DN618142 vs. ExPASy Swiss-Prot
Match: FHIT_HUMAN (Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 2.581e-11
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = -1
Query:  340 GTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEKQKLDLDIQMKNRTMEEMAQEADEYR 576
            GT +E +   +SL F++QDGP+AGQTV HVH+H++PRKA     ND   +  +K   + D     R+ EEMA EA   R
Sbjct:   66 GTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKE-DFPASWRSEEEMAAEAAALR 143          
BLAST of DN618142 vs. ExPASy Swiss-Prot
Match: FHIT_MOUSE (Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN=Fhit PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 5.749e-11
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = -1
Query:  340 GTQLESYHKASSLAFAIQDGPQAGQTVPHVHIHIVPRKAASSEENDGNKDVKEK-QKLDLDIQMKNRTMEEMAQEADEYR 576
            GT +E + + +S+ F++QDGP+AGQTV HVH+H++PRKA     ND   D  +K  + + D     R+ +EMA EA+  R
Sbjct:   66 GTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPRNDNIYDELQKHDREEEDSPAFWRSEKEMAAEAEALR 145          
The following BLAST results are available for this feature:
BLAST of DN618142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
FHIT_BOVIN1.048e-1248.75Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=F... [more]
NFT1_CAEEL2.581e-1143.04Nitrilase and fragile histidine triad fusion prote... [more]
FHIT_RAT2.581e-1143.21Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegic... [more]
FHIT_HUMAN2.581e-1144.30Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN... [more]
FHIT_MOUSE5.749e-1142.50Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02C17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618142 ID=DN618142; Name=DN618142; organism=Citrus sinensis; type=EST; length=576bp
ACAAACTTTATTCAAACATTTATCATGACATTAGTAATGAAAGTAGCTCA
AAACTAAATACAACACACTTAGATTGATAAAAGACATGCATAATAAACTT
AGAATTTCAGGAATTCCAGCGCAACAAGAGGACGAGTGAAGGATTATTCT
GCATAGGTATGATGTATAATAATTCTATGAAAGCCCCAATGCTTAGCGTA
AGTATTATAAATGTTTATAAACTTCCATGAAGTATTATTGAAGGGCAGTT
TCTTAAATCTCAAACGCATTGGAGGCAGCTTTGATGAAAGCTTGAGAAAA
GCTTAGCGAAAGGCAGTGTTAAATTTTTGACAAAAGCGACCTGTACTCAT
CAGCCTCTTGAGCCATCTCCTCCATGGTCCTGTTCTTCATTTGAATATCT
AAATCAAGCTTCTGCTTCTCCTTCACATCTTTATTCCCATCATTTTCCTC
AGAGCTGGCAGCTTTGCGTGGGACAATATGGATGTGAACATGGGGCACTG
TCTGTCCAGCTTGAGGTCCATCTTGAATGGCAAATGCTAGTGATGAAGCC
TTGTGGTAGCTTTCGAGCTGTGTGCC
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