DN618140

Overview
NameDN618140
Unique NameDN618140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9220 contig Csv1_Contig9220:796..1388. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSH_VICFA (Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.027e-58
Identity = 103/120 (85.83%), Postives = 117/120 (97.50%), Query Frame = -3
Query:  233 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 592
            A A++VP+LRKERE+GLFKPDPRFEEAK+FIRSG FGSYDYNPLLDSLEGN+GYGRGDYFLVGYDFPSY++AQ++VD+AY+D+K+WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI ECR
Sbjct:  721 ATADEVPRLRKERENGLFKPDPRFEEAKKFIRSGVFGSYDYNPLLDSLEGNSGYGRGDYFLVGYDFPSYMDAQEKVDEAYRDKKRWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEECR 840          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSH_SOLTU (Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.303e-57
Identity = 100/120 (83.33%), Postives = 117/120 (97.50%), Query Frame = -3
Query:  233 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITECR 592
            A A++VP+LRK+RE+GLFKPDPRFEEAKQFIRSGAFG+YDYNPLL+SLEGN+GYGRGDYFLVG+DFPSY++AQ RVD+AYKD+K+W+KMSILST+GSGKFSSDRTI+QYAKEIWNI ECR
Sbjct:  717 ATADEVPQLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQARVDEAYKDRKRWIKMSILSTSGSGKFSSDRTISQYAKEIWNIAECR 836          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSH_ARATH (Alpha-glucan phosphorylase, H isozyme OS=Arabidopsis thaliana GN=At3g46970 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.314e-57
Identity = 102/119 (85.71%), Postives = 112/119 (94.12%), Query Frame = -3
Query:  236 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITEC 592
            A A+QVP+LRKEREDGLFKPDPRFEEAKQF++SG FGSYDY PLLDSLEGNTG+GRGDYFLVGYDFPSY++AQ +VD+AYKD+K WLKMSILSTAGSGKFSSDRTIAQYAKEIWNI  C
Sbjct:  720 ATADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSLEGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWLKMSILSTAGSGKFSSDRTIAQYAKEIWNIEAC 838          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSH_WHEAT (Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.004e-54
Identity = 99/119 (83.19%), Postives = 111/119 (93.28%), Query Frame = -3
Query:  236 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITEC 592
            A A+QV  LRK+RE+GLFKPDPRFEEAKQFIRSGAFG+YDY PLLDSLEGNTG+GRGDYFLVGYDFPSY++AQ RVD+AYKD+KKW+KMSIL+TAGSGKFSSDRTI QYAKEIW I+ C
Sbjct:  711 AKADQVAGLRKDRENGLFKPDPRFEEAKQFIRSGAFGTYDYTPLLDSLEGNTGFGRGDYFLVGYDFPSYIDAQARVDEAYKDKKKWVKMSILNTAGSGKFSSDRTIDQYAKEIWGISAC 829          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSL_VICFA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 3.545e-43
Identity = 81/116 (69.83%), Postives = 96/116 (82.76%), Query Frame = -3
Query:  245 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 592
            A A ++  LRKER  G F PDPRFEE K+F+RSG FGSY+Y+ L+ SLEGN G+GR DYFLVG DFPSYLE Q+ VD+AY+DQKKW +MSIL+TAGS KFSSDRTI +YA+EIWNI
Sbjct:  882 AKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIGSLEGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTIHEYAREIWNI 997          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSL1_SOLTU (Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 7.898e-43
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = -3
Query:  245 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 592
            A A ++  LRKER DG F PD RFEE K+F+RSGAFGSY+Y+ L+ SLEGN G+GR DYFLVG DFPSY+E Q++VD+AY+DQK+W  MSIL+TAGS KFSSDRTI +YAK+IWNI
Sbjct:  845 AQAHEIAGLRKERADGKFVPDERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNI 960          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSL2_SOLTU (Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.347e-42
Identity = 80/116 (68.97%), Postives = 94/116 (81.03%), Query Frame = -3
Query:  245 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 592
            A A ++  LRKER +G F PDPRFEE K FIR+G FG+Y+Y  L+ SLEGN GYGR DYFLVG DFP Y+E QD+VD+AY+DQKKW KMSIL+TAGS KFSSDRTI QYA++IW I
Sbjct:  853 AQAHEIAGLRKERAEGKFVPDPRFEEVKAFIRTGVFGTYNYEELMGSLEGNEGYGRADYFLVGKDFPDYIECQDKVDEAYRDQKKWTKMSILNTAGSFKFSSDRTIHQYARDIWRI 968          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHSL_IPOBA (Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.647e-40
Identity = 78/116 (67.24%), Postives = 94/116 (81.03%), Query Frame = -3
Query:  245 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYDYNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNI 592
            A A ++  LRKER +G F PD RFEE K+FI+ G FGS  Y+ LL SLEGN G+GRGDYFLVG DFPSY+E Q++VD+AY+DQK W +MSIL+TAGS KFSSDRTI +YAK+IWNI
Sbjct:  834 AEAHEIAGLRKERAEGKFVPDERFEEVKEFIKRGVFGSNTYDELLGSLEGNEGFGRGDYFLVGKDFPSYIECQEKVDEAYRDQKIWTRMSILNTAGSYKFSSDRTIHEYAKDIWNI 949          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHS2_DICDI (Glycogen phosphorylase 2 OS=Dictyostelium discoideum GN=glpD PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.229e-20
Identity = 48/119 (40.34%), Postives = 76/119 (63.87%), Query Frame = -3
Query:  239 AVAEQVPKLRKEREDGLFKPDPRFEEAKQFIRSGAFGSYD-YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITE 592
            A +E+V K++K   DG F PD R+      I+   FG ++ +  +++S+ G       D++++ YDF SYL+ Q+ +DQ +KD+ KW K SI+++   GKFSSDRTI +YA++IW I E
Sbjct:  796 ARSEEVNKVKKIIHDGKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGN-----DHYILSYDFGSYLDIQNSIDQDFKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEE 909          
BLAST of DN618140 vs. ExPASy Swiss-Prot
Match: PHS1_DICDI (Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15
Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = -3
Query:  236 DPRFEEAKQFIRSGAFGSYD-YNPLLDSLEGNTGYGRGDYFLVGYDFPSYLEAQDRVDQAYKDQKKWLKMSILSTAGSGKFSSDRTIAQYAKEIWNITEC 532
            DPR +E    I  G FG  D + P+LDSL  +      D++L   DFP YL++Q  VD+ +KDQ  W+K SI+++A +  FSSDR + +YA++IW+I  C
Sbjct:  750 DPRLQEVFLNIELGTFGPPDVFRPILDSLIFS------DFYLSIQDFPLYLDSQASVDELWKDQSAWVKKSIINSASTYFFSSDRAMNEYAEQIWDIKPC 843          
The following BLAST results are available for this feature:
BLAST of DN618140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
PHSH_VICFA1.027e-5885.83Alpha-glucan phosphorylase, H isozyme OS=Vicia fab... [more]
PHSH_SOLTU3.303e-5783.33Alpha-glucan phosphorylase, H isozyme OS=Solanum t... [more]
PHSH_ARATH4.314e-5785.71Alpha-glucan phosphorylase, H isozyme OS=Arabidops... [more]
PHSH_WHEAT2.004e-5483.19Alpha-glucan phosphorylase, H isozyme OS=Triticum ... [more]
PHSL_VICFA3.545e-4369.83Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHSL1_SOLTU7.898e-4368.97Alpha-1,4 glucan phosphorylase L-1 isozyme, chloro... [more]
PHSL2_SOLTU1.347e-4268.97Alpha-1,4 glucan phosphorylase L-2 isozyme, chloro... [more]
PHSL_IPOBA1.647e-4067.24Alpha-1,4 glucan phosphorylase L isozyme, chloropl... [more]
PHS2_DICDI3.229e-2040.34Glycogen phosphorylase 2 OS=Dictyostelium discoide... [more]
PHS1_DICDI4.085e-1543.00Glycogen phosphorylase 1 OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C16_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618140 ID=DN618140; Name=DN618140; organism=Citrus sinensis; type=EST; length=594bp
AACCTGGGAAATTCTTATAAAGATAGAATTGTTTAAGAAATTACAACTTA
AAACTTATCTGACAGAGCGATGTTTGAGTAAACAAATGATGGTTAAGACG
GAGAGACAGGTTTATTTAATGATCCCCACAGATTGTGGATTTCCTTTCAT
TTTCTTCCCATCTTAATACATCCTTCCAAGAAATTATATAACCTATTGCA
CATGAAAATTTTTTGCACTTGAATCATGATGTACGGCATTCTGTTATGTT
CCAGATTTCCTTAGCATACTGTGCAATTGTGCGATCACTGCTGAATTTCC
CACTGCCAGCTGTACTTAATATAGACATCTTCAGCCACTTCTTCTGGTCC
TTGTAAGCTTGGTCAACTCTGTCCTGAGCCTCTAAGTAACTTGGGAAGTC
ATAACCAACTAGAAAATAATCACCACGACCATAACCAGTGTTCCCCTCCA
GGGAATCAAGAAGCGGGTTGTAGTCATAGCTTCCAAATGCTCCACTTCTT
ATAAATTGCTTGGCCTCTTCAAACCGAGGATCTGGTTTGAACAATCCATC
TTCTCTTTCCTTACGCAGCTTAGGGACTTGTTCTGCTACTGCAC
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