DN618131

Overview
NameDN618131
Unique NameDN618131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length615
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN618131_ssr172 microsatellite DN618131_ssr172:172..183. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13771 contig Csv1_Contig13771:34..648. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.571e-113
Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 1
Query:   19 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVE FFAV+L NKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID
Sbjct:    1 MTRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVEKFFAVVLGNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 199          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 291.582 bits (745), Expect = 2.143e-78
Identity = 143/201 (71.14%), Postives = 166/201 (82.59%), Query Frame = 1
Query:   16 TMTRLASGV-LITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            TMTR++ GV L  LLV+L  ++  +R    D++KLPS+A RFF         NDDD + GTRWAVL+AGS+G+WNYRHQADICHAYQLLRKGGLK+ENI+VFMYDDIA N ENPRPG IIN PHG DVY+GVPKDYTG+DV V+N FAVIL +KTA+ GGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTS Y+YA++L D
Sbjct:    4 TMTRVSVGVVLFVLLVSLVAVS-AARSGPDDVIKLPSQASRFFRPAE-----NDDDSNSGTRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGLKEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPKDYTGDDVNVDNLFAVILGDKTAVKGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSPYLYANDLND 198          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 3.783e-75
Identity = 129/196 (65.82%), Postives = 156/196 (79.59%), Query Frame = 1
Query:   22 TRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADEL 609
            ++L++ +  T++V    +    RD+ GD L+LPSE  RFF       +  +DDD  GTRWA+LLAGSNG+WNYRHQ+D+CHAYQLLRKGG K+ENIIVFMYDDIA NEENPRPGVIIN P GDDVY GVPKDYTG +V  +NF+A +L NK+ALTGGSGKVVDSGPNDHIF++Y+DHGGPGVLGMP   Y+YA +L
Sbjct:    4 SQLSTLLFFTIVVTFLTVVSSGRDLPGDYLRLPSETSRFFR------EPKNDDDFEGTRWAILLAGSNGYWNYRHQSDVCHAYQLLRKGGSKEENIIVFMYDDIASNEENPRPGVIINKPDGDDVYAGVPKDYTGAEVHADNFYAALLGNKSALTGGSGKVVDSGPNDHIFVYYTDHGGPGVLGMPVGPYLYASDL 193          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 1.757e-72
Identity = 131/196 (66.84%), Postives = 151/196 (77.04%), Query Frame = 1
Query:   22 TRLASGVLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADEL 609
            T   + +L  LL+ L  +    RD+ GD L+LPS++       G G  V+      GTRWA+L AGS+G+WNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFN ENPR GVIIN P+GD+VYKGVPKDYTGEDVT  NF+A +L +K+ LTGGSGKVV+SGPNDHIFIFYSDHGGPGVLG P   YIYA +L
Sbjct:    4 TTATTSLLALLLLFLVALVSAGRDLVGDFLRLPSDS-------GNGDNVH------GTRWAILFAGSSGYWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNSENPRRGVIINSPNGDEVYKGVPKDYTGEDVTAHNFYAALLGDKSKLTGGSGKVVNSGPNDHIFIFYSDHGGPGVLGSPAGPYIYASDL 186          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 5.653e-71
Identity = 125/174 (71.84%), Postives = 149/174 (85.63%), Query Frame = 1
Query:   94 IAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            ++GD++KLPS A +FF          +DDDS  T+WAVL+AGS+G+WNYRHQAD+CHAYQLL+KGG+K+ENI+VFMYDDIA NEENPRPGVIIN P+G+DVY GVPKDYTG++V V+N  AVIL NKTAL GGSGKVVDSGPNDHIFI+YSDHGGPGVLGMPTS  +YA++L D
Sbjct:   18 VSGDVIKLPSLASKFFR------PTENDDDS--TKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENIVVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPKDYTGDEVNVDNLLAVILGNKTALKGGSGKVVDSGPNDHIFIYYSDHGGPGVLGMPTSPNLYANDLND 183          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.349e-64
Identity = 113/148 (76.35%), Postives = 129/148 (87.16%), Query Frame = 1
Query:  172 DDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            DDDD +GTRWAVL+AGS GF NYRHQAD+CHAYQLLRKGGLK+ENIIVFMYDDIA NE NPRPGVIINHP G+DVY GVPKDYTGE VT +N +AV+L +K+A+ GGSGKVVDS PND IF++YSDHGGPGVLGMP   Y+YA + I+
Sbjct:   54 DDDDQLGTRWAVLVAGSMGFGNYRHQADVCHAYQLLRKGGLKEENIIVFMYDDIAKNELNPRPGVIINHPQGEDVYAGVPKDYTGEHVTAKNLYAVLLGDKSAVQGGSGKVVDSKPNDRIFLYYSDHGGPGVLGMPNLPYLYAMDFIE 201          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.338e-63
Identity = 109/146 (74.66%), Postives = 126/146 (86.30%), Query Frame = 1
Query:  178 DDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            DD VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA+N  NPRPGVIINHP G DVY GVPKDYTGEDVT EN +AVIL +K+ + GGSGKV++S P D IFIFYSDHGGPGVLGMP + ++YA + ID
Sbjct:   34 DDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIAYNAMNPRPGVIINHPQGPDVYAGVPKDYTGEDVTPENLYAVILGDKSKVKGGSGKVINSNPEDRIFIFYSDHGGPGVLGMPNAPFVYAMDFID 179          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 9.664e-63
Identity = 116/192 (60.42%), Postives = 142/192 (73.96%), Query Frame = 1
Query:   40 VLITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            +++ L+      A  +R     ++KLP+E             V+ D D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGGLK+ENI+VFMYDDIA NE NPR GVIINHP G+D+Y GVPKDYTG++VT EN FAVIL +K+ L GGSGKV++S P D IFI+YSDHGGPG+LGMP   Y+YA + ID
Sbjct:   20 MMVVLVRVHGAAARPNRKEWDSVIKLPTEP------------VDADSDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGLKEENIVVFMYDDIATNELNPRHGVIINHPEGEDLYAGVPKDYTGDNVTTENLFAVILGDKSKLKGGSGKVINSKPEDRIFIYYSDHGGPGILGMPNMPYLYAMDFID 199          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 6.926e-61
Identity = 111/191 (58.12%), Postives = 143/191 (74.87%), Query Frame = 1
Query:   43 LITLLVALAGIADGSRDIAGDILKLPSEAYRFFHNGGGGAKVNDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            ++ +++ + G     +D    ++KLP++            +V+ + D VGTRWAVL+AGSNG+ NYRHQAD+CHAYQLL KGG+K+ENI+VFMYDDIA +E NPRPGVIIN+P G DVY GVPKDYTGE VT  NFFAV+L +K+ + GGSGKV++S P D IF++YSDHGGPGVLGMP   Y+YA + ID
Sbjct:   22 MLVMVMRIQGTNGKEQD---SVIKLPTQ------------EVDAESDEVGTRWAVLVAGSNGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIATHELNPRPGVIINNPQGPDVYAGVPKDYTGESVTSHNFFAVLLGDKSKVKGGSGKVINSKPEDRIFVYYSDHGGPGVLGMPNMPYLYAMDFID 197          
BLAST of DN618131 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 231.491 bits (589), Expect = 2.632e-60
Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = 1
Query:  169 NDDDDSVGTRWAVLLAGSNGFWNYRHQADICHAYQLLRKGGLKDENIIVFMYDDIAFNEENPRPGVIINHPHGDDVYKGVPKDYTGEDVTVENFFAVILXNKTALTGGSGKVVDSGPNDHIFIFYSDHGGPGVLGMPTSRYIYADELID 615
            + D+D VGTRWAVL+AGS+G+ NYRHQAD+CHAYQ+LRKGGLK+ENI+V MYDDIA +  NPRPG +INHP GDDVY GVPKDYTG  VT  NF+AV+L ++ A+ GGSGKV+ S PNDHIF++Y+DHGGPGVLGMP + +IYA + I+
Sbjct:   42 DQDEDGVGTRWAVLVAGSSGYGNYRHQADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPKDYTGSSVTAANFYAVLLGDQKAVKGGSGKVIASKPNDHIFVYYADHGGPGVLGMPNTPHIYAADFIE 190          
The following BLAST results are available for this feature:
BLAST of DN618131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
VPE_CITSI1.571e-11398.49Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH2.143e-7871.14Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA3.783e-7565.82Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU1.757e-7266.84Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH5.653e-7171.84Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO1.349e-6476.35Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
LEGU_CANEN4.338e-6374.66Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_SOYBN9.664e-6360.42Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU6.926e-6158.12Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH2.632e-6068.46Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C11_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618131 ID=DN618131; Name=DN618131; organism=Citrus sinensis; type=EST; length=615bp
CAACCCCCTTCAAAAACCATGACGCGCCTTGCCTCCGGCGTGCTAATCAC
GCTCCTAGTCGCTCTTGCAGGAATCGCCGATGGAAGCAGAGACATAGCAG
GTGACATTCTGAAGCTACCATCGGAAGCCTATAGGTTCTTCCATAATGGT
GGGGGAGGGGCAAAGGTCAACGATGATGATGATTCTGTCGGCACGAGATG
GGCCGTCCTGCTTGCCGGATCTAATGGCTTCTGGAATTACAGGCATCAGG
CTGATATTTGTCATGCTTATCAACTCTTGAGGAAAGGTGGGCTGAAGGAT
GAAAATATTATTGTTTTCATGTATGATGACATCGCTTTCAATGAAGAGAA
CCCAAGGCCTGGAGTCATCATTAACCACCCCCATGGCGATGATGTTTACA
AAGGAGTTCCAAAGGATTACACGGGGGAAGATGTTACTGTTGAAAACTTT
TTTGCTGTTATCCTGNGAAATAAAACAGCTCTTACAGGGGGCAGTGGGAA
GGTTGTGGATAGCGGCCCCAATGATCATATTTTCATATTCTACTCAGATC
ATGGTGGCCCTGGGGTGCTAGGGATGCCCACCAGTCGATACATATATGCT
GATGAACTGATCGAT
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