DN618130

Overview
NameDN618130
Unique NameDN618130
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length575
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1272..1846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.582e-45
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = -2
Query:  314 EKGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 574
            EKGPEILNTVRPAGQPLVDDWGCLKSLVRT ESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  408 EKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.814e-33
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = -2
Query:  314 EKGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 574
            EK PE+LN VRPAG  LVDDW CLK++VRT E+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  398 EKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.536e-32
Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = -2
Query:  314 EKGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 574
            EKG E+L+ VRPAG PLVD+W CLK++V+T E+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  407 EKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 7.621e-32
Identity = 60/86 (69.77%), Postives = 72/86 (83.72%), Query Frame = -2
Query:  314 KGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 571
            +GPE+LN VR AGQPLVDDW CLK+ VR  E HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  409 RGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 2.452e-30
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = -2
Query:  314 KGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 571
            +G  +LN VRP+G+PLVDDW CLKSLVR  E HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  393 EGHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.209e-22
Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = -2
Query:  314 EKGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 574
            +K   IL +VR  G PLVDDWGCLKS+VR  E+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  411 KKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.150e-22
Identity = 46/86 (53.49%), Postives = 60/86 (69.77%), Query Frame = -2
Query:  314 KGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 571
            KG  +L +VR  G  LVDDW CLKS+VR  E+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  410 KGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.905e-21
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = -2
Query:  314 EKGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 574
            EK   +L +VR  G PLVDDW CLKS+VR  E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  407 EKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.348e-20
Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = -2
Query:  365 ILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 559
            +LN VR  G PLVDDW CLKS+VR  E HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  403 VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
BLAST of DN618130 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.761e-20
Identity = 44/86 (51.16%), Postives = 58/86 (67.44%), Query Frame = -2
Query:  314 KGPEILNTVRPAGQPLVDDWGCLKSLVRTXESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 571
            K   +L++VR  G PLVDDW CLKS+VR  E+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  390 KSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
The following BLAST results are available for this feature:
BLAST of DN618130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.582e-4598.85Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU1.814e-3373.56Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA1.536e-3272.41Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH7.621e-3269.77Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH2.452e-3067.44Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO3.209e-2254.02Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN7.150e-2253.49Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU7.905e-2151.72Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEB_ARATH1.348e-2066.15Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
LEGU_CANEN1.761e-2051.16Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02C11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618130 ID=DN618130; Name=DN618130; organism=Citrus sinensis; type=EST; length=575bp
AGCAACACCACTGAAGAGGGTTGAGTTGCACGGTCTACAAATCAGGAACA
AATATAGCTACATAAGCATAAAATAGCATCGCATACATCCAAAATATATA
CTATCAAATTACAACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATA
ATTACAAGGAAGCAATCACCAGCCAAATGAAAATAGACATTGCCATAAAT
GGAAGCAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTA
TAATGAAAACTAACATATTTCAAGAACTGGCTTATGATATTCGCACAGTT
CTCGGCTTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCA
GAAGGAATATTTTCACAGGCTTGTGCTGATGCTTCCGCCATCTTCTCTTT
CCCAATTCCTGTATTACAGATGTTTGCAAGAGAACGCATGTGCTTCATTC
CATATTGCGATAGAGCTCCACAGTGCGACTCANAAGTCCTCACCAGTGAT
TTGAGGCAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGT
GTTCAAGATCTCTGGACCTTTCTCA
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