DN618128

Overview
NameDN618128
Unique NameDN618128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5271 contig Csv1_Contig5271:314..825. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618128 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.436e-46
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 3
Query:   90 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLGTISRTGIMDKNDLTPAVREDSGASSAWAPDPITGYYRPENRADEIDPAELREMLLNHKVRAH 380
            MARSLFKAKLLLAPVADGISLSI RRGYAAAAPLGTISRTGIM+KNDL PAVREDSGASSAWAPDPITGYYRPENRA EIDPAELREMLLNHKVRAH
Sbjct:    1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97          
BLAST of DN618128 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 3
Query:   90 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLG---TISRTGIMDKNDLTPAVREDSGA-----SSAWAPDPITGYYRPENRADEIDPAELREMLLNHKVRA 377
            MARS+   KLL A + DG+ +SI RRGY+ A P     +  R G M K +   A++E S +     SSAWAPDP+TGYYRPEN   EID AELREMLLNH+VR+
Sbjct:    1 MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104          
BLAST of DN618128 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.497e-19
Identity = 53/104 (50.96%), Postives = 67/104 (64.42%), Query Frame = 3
Query:   90 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLG---TISRTGIMDKNDLTPAVREDSGA-----SSAWAPDPITGYYRPENRADEIDPAELREMLLNHKVRA 377
            MARS+   K L A V D + +SI RRGY+ A P     +  R G M K +   A++E S +     SSAWAPDP+TGYYRPEN   EID A+LREM+LNH+VR+
Sbjct:    1 MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSSSETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104          
BLAST of DN618128 vs. ExPASy Swiss-Prot
Match: ARG2_PHAAU (Indole-3-acetic acid-induced protein ARG2 OS=Phaseolus aureus GN=ARG2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.500e-11
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 3
Query:   90 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLG-TISRTGIMDKNDLTPAVREDS---GASSAWAPDPITGYYRPENRADEIDPAELREMLLNHK 368
            MARS    K+L A VADG S +  R G+AAAA    + +R G     ++ P   E+    G   +W PDP+TGYYRPEN  +EID A++R  +L  K
Sbjct:    1 MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96          
The following BLAST results are available for this feature:
BLAST of DN618128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
LEA5_CITSI1.436e-4695.88Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
LEA5D_GOSHI2.089e-2153.85Late embryogenesis abundant protein Lea5-D OS=Goss... [more]
LEA5A_GOSHI1.497e-1950.96Late embryogenesis abundant protein Lea5-A OS=Goss... [more]
ARG2_PHAAU1.500e-1143.30Indole-3-acetic acid-induced protein ARG2 OS=Phase... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02C10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618128 ID=DN618128; Name=DN618128; organism=Citrus sinensis; type=EST; length=512bp
AGAAACTTTCTTCTTCTGTAGTAGCACTGTACAGAAACATCCCAGCTAGC
TATCTTCATATCTATTAAGTTCTATAAGTAAATAAAACAATGGCCCGCTC
TCTCTTCAAAGCTAAGCTTCTTCTTGCTCCTGTTGCTGATGGCATCTCGC
TCTCCATTGGCAGGAGAGGATATGCTGCAGCAGCACCCTTGGGAACCATA
TCTCGGACTGGTATCATGGACAAAAATGATTTGACGCCTGCGGTGAGAGA
GGATTCTGGGGCCTCTTCTGCCTGGGCCCCAGATCCCATCACTGGGTACT
ACAGGCCGGAGAATCGGGCGGACGAGATTGATCCAGCAGAGCTTCGAGAG
ATGCTGTTGAACCACAAAGTCAGGGCACACTAGGGAGTGGTCGCGCATAG
CAGCAGATCCTTTGCTGCTAGCGGTGCTTTAACTTTTAAGTGATGGTGTT
ACAGTAGCAATTTTGACTCACTCTAAAGTCTTTGCTGTTGTTTTGATATC
AACTGTTATTTA
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