DN618122

Overview
NameDN618122
Unique NameDN618122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length498
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:29..526. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.152e-44
Identity = 90/153 (58.82%), Postives = 115/153 (75.16%), Query Frame = 2
Query:   53 FRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAY--NALGEKEKRFEIFKDNLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMYLGARF---GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            F  PTMA+  L +  VSSA+DMSI+SYD+ H   ++  R++ EVM ++EAW VKHGKA   N+L EK++RFEIFKDNLRF+DEHN +N +Y++GL RFADLTN+EYRS YLGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAV
Sbjct:    3 FLKPTMAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAV 149          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.068e-35
Identity = 82/152 (53.95%), Postives = 109/152 (71.71%), Query Frame = 2
Query:   44 MGLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQ-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            MGL +S  ++M LLF  T+   L +S+        +K+ + RT+DEV  M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN+  NR+YKVGLN+FADLT+EE+RS YLG   G+ +T    K S+RY PRVG+ LP  VDWR  GAV
Sbjct:    1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAV 139          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 144.05 bits (362), Expect = 3.443e-34
Identity = 81/152 (53.29%), Postives = 108/152 (71.05%), Query Frame = 2
Query:   44 MGLFRSPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQ-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            MGL +S  ++M LLF  T+   L +S+        +K+ + RT+DEV  M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN+  NR+YKVGLN+FADLT+EE+RS YL    G+ +T    K S+RY PRVG+ LP  VDWR  GAV
Sbjct:    1 MGLPKS-FVSMSLLFFSTL---LILSLA-----FNAKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAV 139          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 2.728e-31
Identity = 73/150 (48.67%), Postives = 97/150 (64.67%), Query Frame = 2
Query:   59 SPTMAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            S  +A   L L    +A DMSIVSY +         R+++E   ++  W  +HGK+YNA+GE+E+R+  F+DNLR+IDEHN+       ++++GLNRFADLTNEEYR  YLG R   +R   + K SDRYL    EALP+SVDWR KGAV
Sbjct:    4 SMALAAAALLLLLSLAAADMSIVSYGE---------RSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAV 141          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.554e-29
Identity = 67/143 (46.85%), Postives = 98/143 (68.53%), Query Frame = 2
Query:   71 AMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS-QNRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            A+ +L +  +SS+L ++         +++   R + EV  M+E W V++ K YN LGEKE+RF+IFKDNL+F+DEHNS  +RT++VGL RFADLTNEE+R++YL  +    + S+K   ++RYL + G+ LPD VDWR  GAV
Sbjct:   12 ALVILSVLLLSSSLGVA---------TETEIERNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVK---TERYLYKEGDVLPDEVDWRANGAV 142          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.290e-28
Identity = 66/151 (43.71%), Postives = 96/151 (63.58%), Query Frame = 2
Query:   68 MAMFLLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYN----ALGEKEKRFEIFKDNLRFIDEHNSQNR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRV-GEALPDSVDWRKKGAV 496
            +++ LL++    ++ D SI++ D         WRTD+EV  ++  W  +HGK  N     + +++KRF IFKDNLRFID HN  N+  TYK+GL +F DLTN+EYR +YLGAR    R   K+K  + +Y   V G+ +P++VDWR+KGAV
Sbjct:    8 LSLLLLYVVVSLASGDESIIN-DHLQLPSDGKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAV 157          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.290e-28
Identity = 71/157 (45.22%), Postives = 95/157 (60.51%), Query Frame = 2
Query:   44 MGLFRSPTMAMFLLFLFTVS--SALDMSIVSYDKTHESKSSSWRT----DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            MG  +S  M +FLL L   S  +A+DMS+VS +  H   +   R     D E   MFE+W VKHGK Y+++ EKE+R  IF+DNLRFI   N++N +Y++GLNRFADL+  EY  +  GA     R  +    S+RY    G+ LP SVDWR +GAV
Sbjct:    1 MGYAKS-AMLIFLLALVIASCATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAV 156          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.073e-27
Identity = 61/130 (46.92%), Postives = 90/130 (69.23%), Query Frame = 2
Query:  110 LDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQ-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            L + ++S      + + S R + EV+ M+E W V++GK YN LGEKE+RF+IFKDNL+ I+EHNS  NR+Y+ GLN+F+DLT +E+++ YLG +   K     S  ++RY  + G+ LPD VDWR++GAV
Sbjct:   13 LSVLLISISLGVVTATESQRNEGEVLTMYEQWLVENGKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSL---SDVAERYQYKEGDVLPDEVDWRERGAV 139          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.549e-26
Identity = 63/152 (41.45%), Postives = 93/152 (61.18%), Query Frame = 2
Query:   44 MGLFRSPTMAMFL-LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            MG  +S  + + + + + + ++A+DMS+VSYD  +   S     D E   +FE+W VKHGK Y ++ EKE+R  IF+DNLRFI+  N++N +Y++GL  FADL+  EY+ +  GA     R  +    SDRY     + LP SVDWR +GAV
Sbjct:    1 MGSAKSAMLILLVAMVIASCATAIDMSVVSYDDNNRLHSVF---DAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAV 149          
BLAST of DN618122 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 9.399e-24
Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 2
Query:   53 FRSPTMAMFLLFLFTVSSAL-------DMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSQNRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAV 496
            F +P+++ F L +   +SAL       D SIV Y   H + +      D+++ +FE+W  +H KAY ++ EK  RFE+F++NL  ID+ N++  +Y +GLN FADLT+EE++  YLG      + S K + S  +  R    LP SVDWRKKGAV
Sbjct:    3 FSAPSLSKFSLLVAISASALLCCAFARDFSIVGYTPEHLTNT------DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAV 149          
The following BLAST results are available for this feature:
BLAST of DN618122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RD21A_ARATH2.152e-4458.82Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ACTN_ACTDE4.068e-3553.95Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH3.443e-3453.29Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ORYA_ORYSJ2.728e-3148.67Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CPR1_ARATH2.554e-2946.85Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
GCP1_ARATH6.290e-2843.71Germination-specific cysteine protease 1 OS=Arabid... [more]
CPR4_ARATH6.290e-2845.22Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR2_ARATH1.073e-2746.92Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CPR3_ARATH1.549e-2641.45Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
XCP1_ARATH9.399e-2440.00Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618122 ID=DN618122; Name=DN618122; organism=Citrus sinensis; type=EST; length=498bp
CTTCTTCTCCCAAAAAGAAAAAAAAAAGCTCTTTTCTCCAAAGATGGGTT
TGTTCAGATCACCAACCATGGCCATGTTTTTACTTTTTCTCTTCACTGTA
TCATCTGCCTTGGACATGTCGATTGTATCTTATGATAAAACCCATGAGTC
AAAATCTAGCAGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGG
CCTGGTTTGTGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAG
AAAAGGTTTGAGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAA
CTCACAGAACCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGA
CCAACGAGGAGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAA
AGGACTTCCTTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGG
CGAGGCGTTGCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGC
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