DN618116

Overview
NameDN618116
Unique NameDN618116
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DN618116_ssr457 microsatellite DN618116_ssr457:457..468. BLAST: Citrus ESTs to Prunus persica proteins V1
DN618116_ssr480 microsatellite DN618116_ssr480:480..491. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8174 contig Csv1_Contig8174:316..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 1.016e-26
Identity = 64/116 (55.17%), Postives = 79/116 (68.10%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 367
            G  I    DEGV+K I R+     +    D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYGSAGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTEMPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVEL 134          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.732e-26
Identity = 64/116 (55.17%), Postives = 79/116 (68.10%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 367
            G  I    DEGV+K I R+      +   D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYGSAGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETAMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVEL 134          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26
Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 367
            G  I    DEGV+K I R+          D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGE+ ++TCKPEYAYGSAGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVEL 134          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP4_MOUSE (FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26
Identity = 63/116 (54.31%), Postives = 78/116 (67.24%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 367
            G  I    DEGV+K I R+          D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYG+AGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGAAGSPPKIPPNATLVFEVEL 134          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 115.161 bits (287), Expect = 1.915e-25
Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVEL 367
            G  I    DEGV+K I R+          D   V VHY G L + G  FD++ +    FSF+LGKG VI+AWDIA+ +MKVGEV  +TCKPEYAYG AGSPP +PP+ATL+FEVEL
Sbjct:   22 GVDISPKQDEGVLKVIKREGTGTETPMIGDR--VFVHYTGWLLD-GTKFDSSLDRKDRFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGLAGSPPKIPPNATLVFEVEL 134          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24
Identity = 56/117 (47.86%), Postives = 79/117 (67.52%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 370
            G+ IDL+GD GV+K+I+++              V +HY G L + G  FD++   N  F F LGKG+VI+A+D+ + +MK+GE   LTC P YAYG+AGSPP +PPDATLIFE+E++
Sbjct:    4 GNKIDLSGDGGVLKEILKEGT--GTETPHSGCTVSLHYTGRLVD-GTEFDSSLSRNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEML 117          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP5_PONAB (FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.051e-23
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 370
            G+ I    D GV+K + R    +      D   V VHY+G L+  G+ FD++H+ N  F F LGKG VI+AWDI + +MK GE+  L CKPEYAYGSAGS P +P +ATL FE+EL+
Sbjct:   22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDK--VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 135          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP5_HUMAN (FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.051e-23
Identity = 57/117 (48.72%), Postives = 75/117 (64.10%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 370
            G+ I    D GV+K + R    +      D   V VHY+G L+  G+ FD++H+ N  F F LGKG VI+AWDI + +MK GE+  L CKPEYAYGSAGS P +P +ATL FE+EL+
Sbjct:   22 GEDITSKKDRGVLKIVKRVGNGEETPMIGDK--VYVHYKGKLSN-GKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELL 135          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.812e-23
Identity = 55/121 (45.45%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVD----VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 370
            G+ +    D GV+K + R      +   E+ P++     VHY G LA  G+ FD++H+ N  F F +GKG VI+AWDI + +MK GE+  L CKPEYAYG+ GS P +P +ATL FEVEL+
Sbjct:   22 GEDVTSKKDRGVLKIVKR------VGHGEETPMIGDRVYVHYNGKLAN-GKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELL 135          
BLAST of DN618116 vs. ExPASy Swiss-Prot
Match: FKBP5_SAGOE (FK506-binding protein 5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.518e-22
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 2
Query:   20 GDSIDLTGDEGVIKKIVRQAKPDALSPTEDLPLVD----VHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 370
            G+ +    D GV+K + R      +   E+ P++     VHY G L+  G+ FD++H+ N  F F +GKG VI+AWDI + +MK GE+  L CKPEYAYG+ GS P +P +ATL FEVEL+
Sbjct:   22 GEDVTSKKDRGVLKIVKR------VGHGEETPMIGDKVYVHYNGKLSN-GKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELL 135          
The following BLAST results are available for this feature:
BLAST of DN618116 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
FKBP4_HUMAN1.016e-2655.17FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKBP4_RAT1.732e-2655.17FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP4_RABIT2.955e-2654.31FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKBP4_MOUSE6.583e-2654.31FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 P... [more]
FKBP4_BOVIN1.915e-2554.31FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKB59_DROME4.718e-2447.86FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKBP5_PONAB1.051e-2348.72FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 P... [more]
FKBP5_HUMAN1.051e-2348.72FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 P... [more]
FKBP5_SAIBB6.812e-2345.45FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]
FKBP5_SAGOE1.518e-2244.63FK506-binding protein 5 OS=Saguinus oedipus GN=FKB... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02C02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618116 ID=DN618116; Name=DN618116; organism=Citrus sinensis; type=EST; length=521bp
TAAGCATTGAGAAGTTATGGGTGATTCAATTGATTTGACGGGTGATGAAG
GTGTCATCAAGAAGATCGTAAGGCAAGCTAAACCTGATGCTCTCTCTCCT
ACTGAGGACCTTCCTCTTGTTGATGTTCATTATGAAGGCAGTCTTGCTGA
AACTGGTGAAGTTTTCGATACCACACATGAAGACAATACTGTATTTTCTT
TTGAGCTTGGGAAGGGTTCAGTGATTCGGGCTTGGGATATTGCATTAAGA
AGCATGAAGGTTGGGGAGGTTGCAAAACTCACTTGCAAGCCAGAATATGC
CTATGGCAGTGCAGGATCTCCTCCAGATGTCCCACCTGATGCGACACTTA
TTTTTGAGGTGGAGTTGGTGGCCTGCAGGCCAAGGAAAGGTTCTAGTCTT
GGTAGCGTATCGGAAGAGAGAGCCAGGCTAGAGGAGCTTAAGAGGCAAAG
AGAGCTTGCTGCTGCTGCGAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAG
CCAAAGCTGCAGCAGCTGCTC
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