DN618106

Overview
NameDN618106
Unique NameDN618106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length389
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2324 contig Csv1_Contig2324:88..476. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.266e-50
Identity = 96/109 (88.07%), Postives = 100/109 (91.74%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQ-TQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GANRY E QPIGTAAQ   D KDY EPPPAPLFEPGEL SWSFYRAGIAEFVATFLFLYIT+LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTA 109          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 3.110e-49
Identity = 92/108 (85.19%), Postives = 99/108 (91.67%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GAN++ E QPIGTAAQ  D KDY EPPPAPLFEPGEL SWSFYRAGIAEF+ATFLFLYITVLTVMGV+ S SKC+TVGIQGIAW+FGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGSDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSKCATVGIQGIAWSFGGMIFALVYCTA 108          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 4.061e-49
Identity = 94/109 (86.24%), Postives = 100/109 (91.74%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQ-TQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GAN++ E QPIGTAAQ   D KDY EPPPAPLFEPGEL SWSFYRAGIAEFVATFLFLYIT+LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTA 109          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 9.047e-49
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQT----QDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GAN++ E QPIGTAAQ      D KDY EPPPAPLFEPGEL SWSFYRAGIAEFVATFLFLYITVLTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRLGANKFSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSTSKCATVGIQGIAWSFGGMIFALVYCTA 112          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.182e-48
Identity = 92/108 (85.19%), Postives = 99/108 (91.67%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GANRY E QPIGTAAQ  + KDY EPPPAPLFE  EL+SWSFYRAGIAEFVATFLFLYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRLGANRYSERQPIGTAAQGTEEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGVSKSSSKCATVGIQGIAWSFGGMIFALVYCTA 108          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.306e-47
Identity = 90/108 (83.33%), Postives = 100/108 (92.59%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVRVGAN++ E QPIGT+AQ+ D KDY EPPPAPLFEPGELSSWSFYRAGIAEF+ATFLFLYITVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQSTD-KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTA 107          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 4.964e-47
Identity = 89/108 (82.41%), Postives = 96/108 (88.89%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GAN++ E   IGTAAQ  D KDY EPPPAPLFEPGEL SWSFYR GIAEFVATFLFLYI++LTVMGVSKS SKC+TVGIQGIAW+FGGMI ALVYCTA
Sbjct:    1 MEGKEEDVRLGANKFSERHAIGTAAQGTDDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTA 108          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 6.484e-47
Identity = 89/108 (82.41%), Postives = 98/108 (90.74%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVRVGAN++ E QPIGT+AQT   KDY EPPPAP FEPGELSSWSFYRAGIAEF+ATFLFLYITVLTVMGV ++ + C++VGIQGIAWAFGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRVGANKFPERQPIGTSAQTD--KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNMCASVGIQGIAWAFGGMIFALVYCTA 106          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 8.468e-47
Identity = 89/108 (82.41%), Postives = 98/108 (90.74%), Query Frame = 3
Query:   66 MEGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            MEGKEEDVR+GANRY E QPIGTAAQ  + KDY EPP AP+FE  EL+SWSFYRAGIAEFVATFLFLYI++LTVMGV+KS SKC+TVGIQGIAW+FGGMIFALVYCTA
Sbjct:    1 MEGKEEDVRLGANRYTERQPIGTAAQGAEEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVNKSASKCATVGIQGIAWSFGGMIFALVYCTA 108          
BLAST of DN618106 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 1.106e-46
Identity = 87/107 (81.31%), Postives = 99/107 (92.52%), Query Frame = 3
Query:   69 EGKEEDVRVGANRYRESQPIGTAAQTQDVKDYTEPPPAPLFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTA 389
            E KEEDV++GAN++RE+QP+GTAAQT   KDY EPPPAPLFEPGELSSWSFYRAGIAEF+ATFLFLYIT+LTVMG+ +S S CS+VGIQG+AWAFGGMIFALVYCTA
Sbjct:    3 ENKEEDVKLGANKFRETQPLGTAAQTD--KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSLCSSVGIQGVAWAFGGMIFALVYCTA 107          
The following BLAST results are available for this feature:
BLAST of DN618106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
PIP11_ORYSJ6.266e-5088.07Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_ORYSJ3.110e-4985.19Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_MAIZE4.061e-4986.24Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE9.047e-4984.82Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP15_MAIZE1.182e-4885.19Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP14_ARATH1.306e-4783.33Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP11_MAIZE4.964e-4782.41Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP13_ARATH6.484e-4782.41Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP13_ORYSJ8.468e-4782.41Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP1_SOLLC1.106e-4681.31Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02B21_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618106 ID=DN618106; Name=DN618106; organism=Citrus sinensis; type=EST; length=389bp
TATTGATTCAATTCACTCCCAAGAAACTTGAACCTATCTTGTCTATTAAT
TTTCACAAGAACATAATGGAGGGCAAAGAAGAGGATGTAAGAGTGGGAGC
AAATAGGTATCGAGAGAGTCAACCTATTGGAACCGCGGCTCAGACTCAGG
ATGTGAAGGATTACACGGAGCCACCTCCGGCGCCGCTCTTCGAGCCCGGC
GAATTATCGTCGTGGTCCTTTTACAGGGCTGGCATTGCGGAGTTTGTGGC
CACGTTCTTGTTTCTTTACATCACTGTTCTAACAGTGATGGGCGTGTCCA
AATCCAAAAGCAAATGTTCCACTGTGGGAATCCAGGGCATCGCTTGGGCT
TTTGGCGGCATGATCTTCGCTCTAGTCTACTGCACTGCT
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