DN618105

Overview
NameDN618105
Unique NameDN618105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2324 contig Csv1_Contig2324:657..1215. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 3.214e-59
Identity = 109/119 (91.60%), Postives = 115/119 (96.64%), Query Frame = -1 
Query:  208 MLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 564
            +++ GY+KG GLGAEIVGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD AWDDHWIFW GPFIGAALAALYHQIVIRAIPFKSK
Sbjct:  168 VVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK 286
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 5.482e-59
Identity = 104/119 (87.39%), Postives = 116/119 (97.48%), Query Frame = -1 
Query:  208 MLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 564
            +++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD AW+DHWIFW GPF+GAALAA+YHQ++IRAIPFKS+
Sbjct:  170 VVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKSR 288
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.221e-58
Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = -1 
Query:  208 LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 561
            ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD +WDDHWIFW GPFIGAALAALYHQIVIRAIPFKSK
Sbjct:  169 VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK 286
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.221e-58
Identity = 104/119 (87.39%), Postives = 116/119 (97.48%), Query Frame = -1 
Query:  208 MLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 564
            +++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN+D AW+DHWIFW GPFIGAALAA+YHQ++IRAIPFKS+
Sbjct:  170 VVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSR 288
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.595e-58
Identity = 104/119 (87.39%), Postives = 115/119 (96.64%), Query Frame = -1 
Query:  208 MLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 564
            +++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN+D AW DHWIFW GPFIGAALAA+YHQ++IRAIPFKS+
Sbjct:  173 VVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSR 291
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 1.595e-58
Identity = 105/119 (88.24%), Postives = 115/119 (96.64%), Query Frame = -1 
Query:  208 MLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 564
            +++ GY+KGDGLGAEIVGTF+LVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN+  AWDDHWIFW GPFIGAALAA+YHQ+VIRAIPFKS+
Sbjct:  169 VVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKSR 287
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.083e-58
Identity = 106/118 (89.83%), Postives = 114/118 (96.61%), Query Frame = -1 
Query:  208 LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 561
            ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD AWDDHWIFW GPFIGAALAALYHQ+VIRAIPFKS+
Sbjct:  168 VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKSR 285
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 6.061e-58
Identity = 105/118 (88.98%), Postives = 113/118 (95.76%), Query Frame = -1 
Query:  208 LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 561
            ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+I+NKD AWDDHW+FW GPFIGAALAALYH IVIRAIPFKS+
Sbjct:  168 IAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKSR 285
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 7.916e-58
Identity = 104/118 (88.14%), Postives = 113/118 (95.76%), Query Frame = -1 
Query:  208 LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 561
            ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD +WDDHW+FW GPFIGAALAALYH +VIRAIPFKS+
Sbjct:  168 VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKSR 285
[Close]
BLAST of DN618105 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 7.916e-58
Identity = 104/118 (88.14%), Postives = 113/118 (95.76%), Query Frame = -1 
Query:  208 LSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 561
            ++ GY+KG GLGAEI+GTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD +WDDHW+FW GPFIGAALAALYH +VIRAIPFKS+
Sbjct:  168 VAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKSR 285
The following BLAST results are available for this feature:
BLAST of DN618105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
PIP15_ARATH3.214e-5991.60Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP11_ORYSJ5.482e-5987.39Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP14_ARATH1.221e-5890.68Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP12_MAIZE1.221e-5887.39Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE1.595e-5887.39Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP12_ORYSJ1.595e-5888.24Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP13_ARATH2.083e-5889.83Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP12_ARATH6.061e-5888.98Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_VICFA7.916e-5888.14Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH7.916e-5888.14Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02B21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618105 ID=DN618105; Name=DN618105; organism=Citrus sinensis; type=EST; length=564bp
CCCCTTTTTTTTTTTGAACAAGAAACAATAATTTATTTATAATAGGGAAT
CGGCCATGAACATGTATAGTCATACACAATTCAAGAGCCACAAACACCGA
AGGGTTGTACATATACAGCAGATAATTAAAAGCAAACCCAGTGACAGTGG
GCAATTCAACTTCATACATGGCTATTAATTGAACGGATCGAAATTAATGA
CTAATCATTTGGACTTGAATGGGATGGCCCTGATCACAATCTGATGATAT
AAAGCTGCAAGCGCTGCTCCAATGAACGGTCCTGCCCAGAAAATCCAATG
ATCATCCCAGGCTTGGTCCTTGTTGTATATCAGAGCTGCGCCAAGACTCC
TTGCTGGGTTAATGCCTGTTCCTGTGATAGGAATTGTTGCCAAGTGCACC
AAAAACACAGCAAATCCAATGGGCAGGGGTGCCAATATAGGAACATGAGA
ATCGCGGGCATTGCGCTTGGCATCAGTGGCCGAGAAGACAGTGTAAACAA
GAACAAAGGTACCAACAATCTCGGCTCCAAGGCCATCTCCCTTGCTGTAG
CCTTTGCTGAGCAT
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