DN618104

Overview
NameDN618104
Unique NameDN618104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13103 contig Csv1_Contig13103:109..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DN618104 vs. ExPASy Swiss-Prot
Match: Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.876e-20
Identity = 64/176 (36.36%), Postives = 88/176 (50.00%), Query Frame = 1 
Query:  148 DSAAAMKMDLSSPFGSNSEKLAIPPS----PVKQAATVNAFR-DLGSKEETFFDSQPWLDSDCEDDFYSVNGDFTPSRGNTPVHHNFAGAPQVNSTSLPDKTPG-SISEPSPTGKKPKLAELFRQISKEGSEDQHVDEQNTQGSQNTANGKTEIRTTILDVLPSANGTPYVSGVNS 657
            D+ + +   +   F S  +  +IP +    PVK   + ++ +   GSK+ETFFDSQPWL SD +DDF+SVNGDFTPS GNTP        P+ ++    +K P    S P+P  ++ KL ELFR   +E        E+   GS                   SA  TPY+SG NS
Sbjct:   34 DNVSILSPSVKKSFESPRKSTSIPANNNLTPVKSRWSFSSSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTPKSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIRE--------EREESGSS------------------SAISTPYLSGANS 183
The following BLAST results are available for this feature:
BLAST of DN618104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3721_ARATH8.876e-2036.36Uncharacterized protein At3g27210 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02B20_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618104 ID=DN618104; Name=DN618104; organism=Citrus sinensis; type=EST; length=660bp
CTCTGTTCTGGTGCCTCTACAGAAGAAGATTTTCTGATGCTAAGAGCGTC
GCTGGCTTCTTAGTTTTATTTTACCTTTTGTCAATTTAAATAAAGAGAAT
TTAGAGACATGGGTTCGTGCGTATCATCAGCACACAAGAGAACAGCAGAC
TCAGCCGCTGCCATGAAAATGGACTTATCATCACCATTTGGGTCCAATAG
TGAGAAACTTGCGATTCCACCTTCCCCCGTGAAACAAGCGGCGACAGTCA
ACGCGTTTAGAGACCTTGGTAGTAAAGAGGAAACCTTTTTCGATTCTCAA
CCATGGCTAGATTCTGACTGCGAAGATGATTTTTACAGTGTCAATGGAGA
TTTTACCCCATCTCGTGGCAATACTCCAGTCCATCACAACTTTGCAGGGG
CTCCTCAAGTCAACAGCACTTCTCTTCCGGACAAAACTCCCGGTTCCATT
TCTGAACCATCCCCAACAGGAAAGAAACCGAAACTAGCTGAACTGTTCCG
GCAAATTTCTAAAGAAGGTTCAGAAGACCAACATGTTGATGAACAAAACA
CCCAAGGTAGCCAAAACACGGCCAATGGGAAGACAGAAATTAGGACAACT
ATACTTGATGTACTTCCATCAGCAAATGGTACCCCATATGTTTCTGGAGT
TAACTCTGTG
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