DN618103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN618103 vs. ExPASy Swiss-Prot
Match: PSB4_ARATH (Proteasome subunit beta type-4 OS=Arabidopsis thaliana GN=PBG1 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 3.312e-43 Identity = 79/94 (84.04%), Postives = 88/94 (93.62%), Query Frame = -3 Query: 231 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 512 V+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRDRSA+NKLQIAKITEEG T+SQPY+LKT+W F++F NPTAGA GSW Sbjct: 153 VSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246
BLAST of DN618103 vs. ExPASy Swiss-Prot
Match: PSB4_MOUSE (Proteasome subunit beta type-4 OS=Mus musculus GN=Psmb4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.960e-11 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 279 VNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 512 V +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W Sbjct: 175 VAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
BLAST of DN618103 vs. ExPASy Swiss-Prot
Match: PSB4_BOVIN (Proteasome subunit beta type-4 OS=Bos taurus GN=PSMB4 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.960e-11 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 279 VNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 512 V +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W Sbjct: 175 VAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
BLAST of DN618103 vs. ExPASy Swiss-Prot
Match: PSB4_RAT (Proteasome subunit beta type-4 OS=Rattus norvegicus GN=Psmb4 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.559e-11 Identity = 34/80 (42.50%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 279 VNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 512 V +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD + N+ Q+A +TE+G I P + +T W Sbjct: 174 VAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNW 253
BLAST of DN618103 vs. ExPASy Swiss-Prot
Match: PSB4_HUMAN (Proteasome subunit beta type-4 OS=Homo sapiens GN=PSMB4 PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 3.343e-11 Identity = 35/80 (43.75%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 279 VNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 512 V +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W Sbjct: 175 VAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRDARSYNRFQIATVTEKGVEIEGPLSTETNW 254
BLAST of DN618103 vs. ExPASy Swiss-Prot
Match: PSB4_XENLA (Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis GN=psmb4 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 9.725e-11 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 279 VNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 512 V +E +ATGFG +LA+P+LR+ E LS E+ +L+++CM+VL YRD + N+ +I +TE G + P + +T W Sbjct: 153 VAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYNRFEITTVTESGVEVEGPLSSETNW 232 The following BLAST results are available for this feature:
BLAST of DN618103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DN618103 ID=DN618103; Name=DN618103; organism=Citrus sinensis; type=EST; length=514bpback to top |