DN618070

Overview
NameDN618070
Unique NameDN618070
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6187 contig Csv1_Contig6187:46..598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH2_ARATH (Probable inosine-5'-monophosphate dehydrogenase OS=Arabidopsis thaliana GN=At1g16350 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.125e-45
Identity = 88/155 (56.77%), Postives = 117/155 (75.48%), Query Frame = 2
Query:   65 EDGFSADRLFSQGYSYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNK 529
            EDGFSA++LFSQGYSYTYDDV+FLPH+IDF  DAVSLSTRL++ + LS+PCVASPMDTV+E +       LGGIGIVH NC    QA ++  AKS +VPI S +  VFK P+  I   +DF  S++VFV+++GT   ++LGYV+KS+W ++ D++
Sbjct:    5 EDGFSAEKLFSQGYSYTYDDVIFLPHFIDFSTDAVSLSTRLSKRVPLSIPCVASPMDTVSESHMAAAMAALGGIGIVHYNCDIDTQASVIRHAKSLQVPIASDA--VFKCPEHQIGSVDDFGPSSFVFVSQTGTLTPKLLGYVSKSEWSSMKDDQ 157          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH1_ARATH (Inosine-5'-monophosphate dehydrogenase OS=Arabidopsis thaliana GN=IMPDH PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.858e-40
Identity = 84/154 (54.55%), Postives = 111/154 (72.08%), Query Frame = 2
Query:   62 IEDGFSADRLFSQGYSYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVFVTESGTRRS-RILGYVTKSDWENLS 520
            +EDGF AD+LF+QGYSYTYDDV+FLPH+IDF  DAVSLSTRL+R + LS+PCV+SPMDTV+E +       LGGIGIVH NC  A QA ++  AKS + PI S +    K P+  I   + F  S++VFV ++GT  + ++LGYVTKS W+ ++
Sbjct:    4 LEDGFPADKLFAQGYSYTYDDVIFLPHFIDFSTDAVSLSTRLSRRVPLSIPCVSSPMDTVSESHMAAAMASLGGIGIVHYNCGIAAQASIIRQAKSLKHPIASDA--GVKFPEYEITSLDAFGPSSFVFVEQTGTMTTPKLLGYVTKSQWKRMN 155          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH3_YEAST (Probable inosine-5'-monophosphate dehydrogenase IMD3 OS=Saccharomyces cerevisiae GN=IMD3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 6.641e-22
Identity = 67/178 (37.64%), Postives = 93/178 (52.25%), Query Frame = 2
Query:   29 TAVEMDFSPLPIEDGFSADRLFSQGY--SYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFD---GSNYVFVTESGTRRSRILGYVTKSDWENLSDNKV*IFDL 547
            TA+E   S LP  DG S   L         TY+D + LP  +DFP   VSL T+LTRNI L+ P V+SPMDTVTE         LGGIG +H NCT  DQA +V   K+      ++ + +  +P   + +A       G +   VTE G R  +++G VT  D + + DN + + D+
Sbjct:    9 TALEFAKS-LPRLDGLSVQELMDSKTRGGLTYNDFLVLPGLVDFPSSEVSLQTKLTRNITLNTPFVSSPMDTVTESEMAIFMALLGGIGFIHHNCTPEDQADMVRRVKNYENGFINNPIVI--SPTTTVGEAKSMKERFGFSGFPVTEDGKRNGKLMGIVTSRDIQFVEDNSLLVQDV 183          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH2_YEAST (Inosine-5'-monophosphate dehydrogenase IMD2 OS=Saccharomyces cerevisiae GN=IMD2 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.304e-21
Identity = 63/176 (35.80%), Postives = 92/176 (52.27%), Query Frame = 2
Query:   41 MDFSP-LPIEDGFSADRLFSQGY--SYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVF----VTESGTRRSRILGYVTKSDWENLSDNKV*IFDL 547
            +DF+  LP  DG S   L         TY+D + LP  +DF    VSL T+LTRNI L++P V+SPMDTVTE         LGGIG +H NCT  DQA +V   K+      ++ + +  +P   + +A       Y F    VT  G R ++++G +T  D + + DN + + D+
Sbjct:   11 LDFTKSLPRPDGLSVQELMDSKIRGGLTYNDFLILPGLVDFASSEVSLQTKLTRNITLNIPLVSSPMDTVTESEMATFMALLGGIGFIHHNCTPEDQADMVRRVKNYENGFINNPIVI--SPTTTVGEAKSMK-EKYGFAGFPVTTDGKRNAKLVGVITSRDIQFVEDNSLLVQDV 183          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH_TRYBB (Inosine-5'-monophosphate dehydrogenase OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.636e-20
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   62 IEDGFSADRLFSQGYSYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVF-KAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSD 523
            + DG +A+ LFSQ    +++D + LP +IDF    V++S + T+NI L LP V+SPMDTVTE         +GGIG++H+NCT   QAR+V S K  R         V    P   I +     G + + VTE G    ++LG V   D + + D
Sbjct:   11 LRDGTTAEELFSQD-GLSFNDFIILPGFIDFDSSKVNVSGQFTKNILLHLPLVSSPMDTVTESSMARAMALMGGIGVIHNNCTVEQQARMVRSVKLYRNGFIMKPKSVSPDVPVSTIRNIKSEKGISGILVTEGGKYDGKLLGIVCTKDIDFVKD 164          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH_DICDI (Inosine-5'-monophosphate dehydrogenase OS=Dictyostelium discoideum GN=impdh PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.636e-20
Identity = 58/155 (37.42%), Postives = 87/155 (56.13%), Query Frame = 2
Query:   68 DGFSADRLFSQGYSYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFD---GSNYVFVTESGTRRSRILGYVTKSDWENLSD 523
            DGF    LF Q + YTYDD++ LP +I+F  D VSL T+LT+NI L+ P V+SPMDTVTE         LGGIGI+H N T  +Q  +V   K +R      +  +  +P   ++D +      G + + +T++G    +++G VT  D + + D
Sbjct:   22 DGFDCFELFQQRHGYTYDDLIMLPGHINFSADDVSLKTKLTKNISLNAPLVSSPMDTVTEHLMAINMALLGGIGIIHYNNTVEEQ--VVEVKKVKRFKNGFITDPIVLSPTHKLSDVDMIKQKYGFSGIPITDTGRIGGKLVGIVTSRDTDFIKD 174          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH1_HUMAN (Inosine-5'-monophosphate dehydrogenase 1 OS=Homo sapiens GN=IMPDH1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20
Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 2
Query:   65 EDGFSADRLFSQGYSYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCIND---ANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSD 523
            EDG +A +LF+     TY+D + LP +IDF  D V L++ LTR I L  P ++SPMDTVTE         +GGIG +H NCT   QA  V   K       +    V  +P   + D   A    G + + +TE+GT  S+++G VT  D + L++
Sbjct:   15 EDGLTAQQLFASADGLTYNDFLILPGFIDFIADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKKFEQGFITD--PVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE 168          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH_SCHPO (Inosine-5'-monophosphate dehydrogenase OS=Schizosaccharomyces pombe GN=gua1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.060e-19
Identity = 58/155 (37.42%), Postives = 85/155 (54.84%), Query Frame = 2
Query:   65 EDGFSADRLFSQGYS--YTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSL---DVFKAPDGCINDA---NDFDGSNYVFVTESGTRRSRILGYVTKSD 505
            +DG S D L    +    T++D + LP YIDF  + VSL TR++RNI L  P ++SPMDTVTED        LGGIG++H NCT  +QA +V     R+V  + +      V  +P   + D     +  G + + +TE+G  R +++G VT  D
Sbjct:   20 KDGLSIDDLIRHNFQGGLTFNDFLILPGYIDFVPNNVSLETRISRNIVLKTPFMSSPMDTVTEDQMAIYMALLGGIGVIHHNCTPEEQAAMV-----RKVKKYENGFILDPVVFSPQHTVGDVLKIKETKGFSGIPITENGKLRGKLVGIVTSRD 169          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH1_YEAST (Putative inosine-5'-monophosphate dehydrogenase IMD1 OS=Saccharomyces cerevisiae GN=IMD1 PE=5 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19
Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = 2
Query:   29 TAVEMDFSPLPIEDGFSADRLFSQGY--SYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVFKAPDGCINDANDFDGSNYVF----VTESGTRRSRILGYVTKSDWENLSDNKV*IFDL 547
            TA+++  S LP  DG S   L          Y+D + LP  +DF    VSL T+LTRNI L++P V+SPMDTVTE         L GIG +H NCT  DQA +V   K+      ++ + +  +P   + +A       Y F    VT  G R ++++G +T  D + + DN + + D+
Sbjct:    9 TALDLTKS-LPRPDGLSVQELMDSKIRGGLAYNDFLILPGLVDFASSEVSLQTKLTRNITLNIPLVSSPMDTVTESEMATFMALLDGIGFIHHNCTPEDQADMVRRVKNYENGFINNPIVI--SPTTTVGEAKSMK-EKYGFAGFPVTADGKRNAKLVGAITSRDIQFVEDNSLLVQDV 183          
BLAST of DN618070 vs. ExPASy Swiss-Prot
Match: IMDH3_CANAL (Probable inosine-5'-monophosphate dehydrogenase OS=Candida albicans GN=IMH3 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.085e-19
Identity = 61/174 (35.06%), Postives = 88/174 (50.57%), Query Frame = 2
Query:   17 TTTTTAVEMDFSPLPIEDGFSADRLFSQGY--SYTYDDVVFLPHYIDFPIDAVSLSTRLTRNIDLSLPCVASPMDTVTEDYXXXXXXXLGGIGIVHSNCTAADQARLVVSAKSRRVPIFSSSLDVF-KAPDGCINDANDFDGSNYVFVTESGTRRSRILGYVTKSDWENLSDNK 529
            T+  T+   D+   P +DG S   L         TY+D + LP  I+FP  AVSL T+LT+ I L  P V+SPMDTVTE+        LGGIGI+H NCT+ +QA +V   K       +  + +  +   G +    +  G     VTE+G    +++G +T  D +   DNK
Sbjct:    5 TSKATSYLKDY---PKKDGLSVKELIDSTNFGGLTYNDFLILPGLINFPSSAVSLETKLTKKITLKSPFVSSPMDTVTEENMAIHMALLGGIGIIHHNCTSEEQAEMVRKVKKYENGFINDPVVISPEVTVGEVKKMGEVLGFTSFPVTENGKVGGKLVGIITSRDIQFHEDNK 175          
The following BLAST results are available for this feature:
BLAST of DN618070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
IMDH2_ARATH1.125e-4556.77Probable inosine-5'-monophosphate dehydrogenase OS... [more]
IMDH1_ARATH1.858e-4054.55Inosine-5'-monophosphate dehydrogenase OS=Arabidop... [more]
IMDH3_YEAST6.641e-2237.64Probable inosine-5'-monophosphate dehydrogenase IM... [more]
IMDH2_YEAST4.304e-2135.80Inosine-5'-monophosphate dehydrogenase IMD2 OS=Sac... [more]
IMDH_TRYBB1.636e-2037.42Inosine-5'-monophosphate dehydrogenase OS=Trypanos... [more]
IMDH_DICDI1.636e-2037.42Inosine-5'-monophosphate dehydrogenase OS=Dictyost... [more]
IMDH1_HUMAN8.118e-2037.18Inosine-5'-monophosphate dehydrogenase 1 OS=Homo s... [more]
IMDH_SCHPO1.060e-1937.42Inosine-5'-monophosphate dehydrogenase OS=Schizosa... [more]
IMDH1_YEAST1.385e-1934.64Putative inosine-5'-monophosphate dehydrogenase IM... [more]
IMDH3_CANAL3.085e-1935.06Probable inosine-5'-monophosphate dehydrogenase OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02B03_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618070 ID=DN618070; Name=DN618070; organism=Citrus sinensis; type=EST; length=553bp
ATCACGTCCTCTCACAACCACCACAACCACCGCCGTTGAAATGGATTTTT
CACCCCTGCCGATCGAAGACGGCTTCTCCGCCGATAGACTCTTCAGCCAA
GGCTACTCCTACACTTACGACGACGTCGTTTTTCTCCCTCACTACATTGA
CTTCCCGATCGACGCCGTTTCGCTCTCCACGCGCCTCACGCGCAACATCG
ATCTCTCCCTCCCTTGCGTCGCCTCCCCCATGGACACCGTCACCGAGGAT
TACATGGCCGCCGCCATGGCCGCGCTCGGTGGTATCGGTATTGTGCACTC
CAACTGCACGGCCGCCGACCAGGCGCGTCTCGTCGTCTCCGCTAAGTCGC
GGCGCGTGCCGATCTTCTCCTCTAGTTTAGATGTTTTTAAAGCGCCTGAT
GGATGTATTAATGATGCTAATGATTTTGATGGCAGCAACTATGTTTTTGT
TACTGAATCTGGCACTAGGAGATCAAGGATTTTGGGTTATGTGACAAAAT
CTGATTGGGAGAATTTGAGTGATAATAAAGTGTAAATATTTGATTTATAT
GCG
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