DN618063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 1.863e-39 Identity = 79/113 (69.91%), Postives = 92/113 (81.42%), Query Frame = -1 Query: 253 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 591 AA ML+ + ++VTVADARFCKPLD LIR LA HE+LITVEEGS+GGFGSHV FL L G+LDG LK R MVLPDRYIDHG+PADQL E+GL HI+AT L+L+G P+EAL Sbjct: 604 AAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.208e-38 Identity = 75/115 (65.22%), Postives = 95/115 (82.61%), Query Frame = -1 Query: 247 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 591 AA++++ + VTVADARFCKPLD LIR+LA+ HE+L+TVEEGS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL I Sbjct: 600 AASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAI 714
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.060e-38 Identity = 75/113 (66.37%), Postives = 94/113 (83.19%), Query Frame = -1 Query: 253 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 591 AA++L+S+ + VTVADARFCKPLD LIR LA HE+L+TVE+GS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL Sbjct: 603 AASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREAL 715
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.600e-30 Identity = 65/109 (59.63%), Postives = 83/109 (76.15%), Query Frame = -1 Query: 271 VLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 597 +LAA L ++ +S TVADARF KP+D LIR+LA +HE+LITVEEGS+GGFGS+V HFL SG+LD LK+R MVLPD + D +PA Q +E+GL++RHI T L LG Sbjct: 522 LLAAEDLNARGLSTTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_BEII9 (1-deoxy-D-xylulose-5-phosphate synthase OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=dxs PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.480e-28 Identity = 67/113 (59.29%), Postives = 79/113 (69.91%), Query Frame = -1 Query: 256 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGP-LKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 591 AA L S ISVTVADARF KPLD DL+R+LA HE+LIT+EEGSVGGFGS V L G+LDG LK RSMVLPD ++DH P ++GL ++ I A VL+ LGR EA Sbjct: 524 AAEQLASYGISVTVADARFAKPLDLDLVRRLAKNHEVLITIEEGSVGGFGSFVMQALAEEGLLDGTGLKFRSMVLPDTFLDHDKPEKLYAQAGLDAKGIVAKVLATLGRENEA 636
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.591e-28 Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = -1 Query: 256 VLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 597 ++AA L++ +S TVADARF KPLD DLIR+LA EHE+L+TVEEGS+GGFG+HV HFL G+L+ LK+R +V+PD ++D P ++GL + I TV + LG+ ++A Sbjct: 534 MIAAEELEAAGLSTTVADARFAKPLDADLIRRLAREHEVLVTVEEGSIGGFGAHVLHFLAHEGLLENGLKVRPLVMPDIFMDQAKPEKMYAKAGLDAAGIVKTVFAALGQAEQA 647
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_RHIL3 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=dxs PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.137e-27 Identity = 62/110 (56.36%), Postives = 76/110 (69.09%), Query Frame = -1 Query: 268 VLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 597 +LAA L + +S TVADARF KPLD DLIRQLA HE++ITVEEGS+GGFGSHV HFL G+LD LKLRS+V+PD +++ P +GL I +TV LGR Sbjct: 521 LLAAEDLDAAGLSTTVADARFAKPLDHDLIRQLARHHEMVITVEEGSIGGFGSHVMHFLATEGLLDNGLKLRSLVMPDIWMEQAKPEAMNAHAGLDRAGIVSTVFKALGR 630
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.137e-27 Identity = 61/113 (53.98%), Postives = 81/113 (71.68%), Query Frame = -1 Query: 253 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 591 AA+ L ++ ++ TV DARF KPLD +LI +LA EHE+LITVEEGSVGGFGSHV H L G LD LK+R + LPD +++H +PA Q E+ GL++ I ATVL+ LG + + Sbjct: 530 AADELAARGLAPTVVDARFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDNGLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEARSVV 642
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_HYPNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=dxs PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.760e-27 Identity = 60/108 (55.56%), Postives = 77/108 (71.30%), Query Frame = -1 Query: 268 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 591 AA ML +Q +S TVADARF KPLD +LI +LA EHE+L+T+EEGS GGFGS V L G LD LK+R M LPD + DH +PA +++GL++RHI+A + LGR Sbjct: 521 AAEMLAAQGLSATVADARFAKPLDNELIERLAREHEVLVTIEEGSRGGFGSFVLEHLANCGGLDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628
BLAST of DN618063 vs. ExPASy Swiss-Prot
Match: DXS_BRASB (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 8.120e-27 Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = -1 Query: 247 AANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 591 AA+ L + +S ++ADARF KPLD +L+ +LA EHEILIT+EEGS+GGFGSHV +L G+LDG LK+RSMVLPD + DH +PA +GL ++ I V LG+ A ++ Sbjct: 524 AADELAAHGLSASIADARFMKPLDEELVLKLAREHEILITIEEGSIGGFGSHVMQYLADQGMLDGGLKMRSMVLPDEFQDHDTPAAMYARAGLDAKGIVRKVFEALGKDYTAEVV 638 The following BLAST results are available for this feature:
BLAST of DN618063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 189
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Sequences
The
following sequences are available for this feature:
EST sequence >DN618063 ID=DN618063; Name=DN618063; organism=Citrus sinensis; type=EST; length=597bpback to top |