DN618057

Overview
NameDN618057
Unique NameDN618057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length585
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618057 vs. ExPASy Swiss-Prot
Match: VATC_ARATH (V-type proton ATPase subunit C OS=Arabidopsis thaliana GN=VHA-C PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.386e-20
Identity = 48/76 (63.16%), Postives = 56/76 (73.68%), Query Frame = -3 
Query:  356 VRVFAESILRNGLPPSFLACVLAPSVKGEKKVRSILEELCGNANSTFWKSEXXXXXXXXXXXXXDSHPYVSFTINL 583
            VR FAESI+R GLPP+FLACVL+P+VK EKKVRSILE LC + NS +WKSE             ++HPYVSFTINL
Sbjct:  299 VRTFAESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWKSEEDAGAMAGLAGDSETHPYVSFTINL 374
The following BLAST results are available for this feature:
BLAST of DN618057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
VATC_ARATH2.386e-2063.16V-type proton ATPase subunit C OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02A21_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618057 ID=DN618057; Name=DN618057; organism=Citrus sinensis; type=EST; length=585bp
TTTTTATAACAAACATCACAAAACTGCATCAATACTTAGTTGATCATTGT
AGGACAACAAATTTAATGTTCAAGAAGAGCATGAAAATTGAAACATAATA
GATACAGAAAATAAAACCTCATAAATAATAACTTAAAATACAAATTTCAG
ATGGCAAGATCTTCTCCACAAGCTTCCTCCATGAGACTGACCAGAACTAT
CCAAGCTGAGATCATAAGTAAACAACAAAAGAATTGAGTTATTGATCCTA
ATATACATATCTTCAACTCCAGCCCATTATTTATTTTAGTCCAGAGGAAT
ACTTGAGACTGAATTCTACCGGACATGGAACCGGGGGACTCAGCATCAAT
CAAACAAGATTGATTGTGAACGACACATAAGGATGAGAATCAGCATCCCC
TCCCAAACCCGCCATCATTCCGCCATCATCTTCGGATTTCCAGAATGTGC
TGTTCGCATTGCCGCACAGTTCTTCAAGAATTGAACGCACTTTTTTTTCA
CCCTTCACGGAGGGAGCTAAAACACATGCCAAGAAAGATGGCGGCAAACC
ATTTCTCAAAATGCTCTCTGCAAAGACACGTACAG
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