DN618051

Overview
NameDN618051
Unique NameDN618051
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:992..1484. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.733e-38
Identity = 68/81 (83.95%), Postives = 74/81 (91.36%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 493
            EV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct:  280 EVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 8.603e-38
Identity = 68/81 (83.95%), Postives = 74/81 (91.36%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 493
            EV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct:  278 EVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 358          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 1.467e-37
Identity = 66/81 (81.48%), Postives = 76/81 (93.83%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 493
            +V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct:  282 QVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 362          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 2.503e-37
Identity = 66/81 (81.48%), Postives = 76/81 (93.83%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 493
            EVV GF+ YKSGVY+ST+CG+TPMDVNHAV+AVGYGVE+G PYWLIKNSWG +WG+ GYFKMEMGKNMCG+ATCASYP+VA
Sbjct:  276 EVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIVA 356          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.270e-37
Identity = 67/81 (82.72%), Postives = 73/81 (90.12%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 493
            EVV  FRFYK GV++S  CGNTPMDVNHAV+AVGYGVED VPYWLIKNSWG  WGD+GYFKMEMGKNMCG+ATC+SYPVVA
Sbjct:  278 EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVVA 358          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 9.512e-37
Identity = 67/81 (82.72%), Postives = 74/81 (91.36%), Query Frame = -3
Query:  251 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 493
            +V+DGFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMC IATCASYPVVA
Sbjct:  281 QVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVVA 361          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.732e-28
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = -3
Query:  257 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 493
            EV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG NWG++GYF +E GKNMCG+A CASYP+
Sbjct:  252 EVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPI 330          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.180e-28
Identity = 50/79 (63.29%), Postives = 62/79 (78.48%), Query Frame = -3
Query:  257 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 493
            EV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP+
Sbjct:  254 EVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 122.094 bits (305), Expect = 1.377e-27
Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = -3
Query:  257 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 493
            EV   F  Y++G+YSST C  TP  VNHAV+AVGYG ++G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP+
Sbjct:  254 EVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332          
BLAST of DN618051 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.798e-27
Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = -3
Query:  257 EVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 493
            EV   F  Y+ G+YSST C  TP  VNHAV+AVGYG E G+PYW++KNSWG NWG  GYF +E GKNMCG+A CAS+P+
Sbjct:  254 EVTADFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASFPI 332          
The following BLAST results are available for this feature:
BLAST of DN618051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSP2_MAIZE1.733e-3883.95Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEU_ARATH8.603e-3883.95Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
ORYC_ORYSJ1.467e-3781.48Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP3_SOLLC2.503e-3781.48Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
ALEUL_ARATH4.270e-3782.72Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
ALEU_HORVU9.512e-3782.72Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATH_RAT4.732e-2864.56Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_PIG6.180e-2863.29Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_HUMAN1.377e-2762.03Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATH_BOVIN1.798e-2763.29Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_02A18_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618051 ID=DN618051; Name=DN618051; organism=Citrus sinensis; type=EST; length=495bp
ACAAAATATATATAACATCCGTTGGTGTCCTAGTCACAATGACTGTTTAC
ATGGACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTG
CTATTGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAA
GCCAACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAG
CAAATGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTA
AGCCACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCC
CCATCTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAG
TTCTTAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGC
AACGACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGC
TGTAAACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAA
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