DN618035

Overview
NameDN618035
Unique NameDN618035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DN618035 vs. ExPASy Swiss-Prot
Match: AB12I_ARATH (Protein ABCI12, chloroplastic OS=Arabidopsis thaliana GN=ABCI12 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 3.821e-39
Identity = 82/124 (66.13%), Postives = 98/124 (79.03%), Query Frame = -1 
Query:  205 TYIGVPVAEXXXXXXXXXXXXXXXFDEVRNVALGIVSRRINWRQLTMLETIDIFASYIRRIFKNIFGHAEQISQAMIVRGFRGDSSTHKIYSFSNSSIGVADFVSLFCLVGVVGAALVSDRFLL 576
            TYIGVPV+E               FDEVR+V+LGIVSRR+NW+QLT+LET+DIFAS+IRRIFKNIF HAEQISQAMIVRGFRG+SS+HKIY FS SS   ADF S+ CL+GV+  AL+S+ FL+
Sbjct:  268 TYIGVPVSEIILTLLLSLRFINLVFDEVRSVSLGIVSRRVNWQQLTVLETLDIFASFIRRIFKNIFRHAEQISQAMIVRGFRGESSSHKIYFFSGSSNKFADFASVLCLIGVISTALLSEYFLV 391
The following BLAST results are available for this feature:
BLAST of DN618035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AB12I_ARATH3.821e-3966.13Protein ABCI12, chloroplastic OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_02A10_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN618035 ID=DN618035; Name=DN618035; organism=Citrus sinensis; type=EST; length=576bp
TTTTTTTTGTTGTTCTAAATGTAACTATATTAGAATCATCCACTAAAAAG
ATTATCCTGTCAAGATTACAGCACCAAAGTATCAACATGAGTTCAGATCA
TATCAAATCCAGAACTACAGAATAAAAACAAGAACCCAATTACTCTCAAC
TGGTATTTTGATACAAAAAGAAAATTACCGCGGCGAGCGTGAACATGGGT
ATCAAAGAAGGAAGCGGTCTGACACAAGTGCAGCACCTACAACACCAACC
AGGCAAAACAAGGACACAAAATCTGCCACCCCAATGGACGAATTTGAAAA
GGAGTAAATTTTGTGAGTGCTGCTGTCCCCCCGAAAGCCTCTAACAATCA
TTGCCTGAGATATTTGCTCAGCGTGGCCGAAAATATTTTTGAAGATCCGG
CGAATGTAGGAAGCAAAAATATCAATCGTCTCCAGCATTGTCAATTGTCT
CCAATTTATCCTACGAGATACTATTCCCAATGCGACATTACGTACCTCAT
CAAACACTAGACTGATGAATCTCAATGAAAGCAAAAGGGTAAGCACTATC
TCAGCCACCGGAACACCAATGTATGT
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