DN617957

Overview
NameDN617957
Unique NameDN617957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.098e-46
Identity = 94/124 (75.81%), Postives = 103/124 (83.06%), Query Frame = -1
Query:  271 KRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 642
            KRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKS+IDVA++QGFQ           L+ADEVFCTGTAVVVSPVGS+TY GKRVSYGEG FG VS+QLY+VLT LQMGLI D M WT+ LS
Sbjct:  290 KRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSMIDVARTQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSVTYKGKRVSYGEGTFGTVSKQLYTVLTSLQMGLIEDNMKWTVNLS 413          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.102e-43
Identity = 89/124 (71.77%), Postives = 101/124 (81.45%), Query Frame = -1
Query:  271 KRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 642
            KRYLEEVSSCNIF+VK NVISTP IKGTILPGITRKSII+VA+SQGF+           ++ADEVFCTGTAVV+SPVGSITY  +R SYGE GFG VS+QLY+ LT LQMGL  D MNWT++LS
Sbjct:  292 KRYLEEVSSCNIFIVKDNVISTPEIKGTILPGITRKSIIEVARSQGFKVEERNVTVDELVEADEVFCTGTAVVLSPVGSITYKSQRFSYGEDGFGTVSKQLYTSLTSLQMGLSEDNMNWTVQLS 415          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.677e-31
Identity = 69/124 (55.65%), Postives = 86/124 (69.35%), Query Frame = -1
Query:  271 KRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 642
            K+YLEE SSCN+FVVKG  ISTP   GTIL GITRKS++++A  QG+Q           +DADEVFCTGTAVVV+PVG+ITY  KRV Y + G  +V Q+L SVL  +Q GLI D   W  +++
Sbjct:  266 KKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEY-KTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.207e-27
Identity = 59/122 (48.36%), Postives = 86/122 (70.49%), Query Frame = -1
Query:  274 RYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 639
            R +EE+++CNIF+VKGN++STP   GTILPG+TRKSI ++A   G+Q           L+A+EVFCTGTAVVV  V ++T+  K+V Y   G  A+S +L+S+LT +QMG++ DK  W +++
Sbjct:  231 RNIEELTACNIFIVKGNIVSTPPTSGTILPGVTRKSISELAHDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKY-RTGEAALSTKLHSMLTNIQMGVVEDKKGWMVDI 351          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.176e-27
Identity = 59/120 (49.17%), Postives = 84/120 (70.00%), Query Frame = -1
Query:  274 LEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 633
            +EEVS+CNIF++KGN++STP   GTILPGITRKSI ++A+  G++           L+A+EVFCTGTAVV+  V ++T+  KRV Y   G  A S +L+ +LT +QMG++ DK  W +E+
Sbjct:  236 IEEVSTCNIFILKGNIVSTPPTSGTILPGITRKSICELARDIGYEVQERDLSVDELLEAEEVFCTGTAVVIKAVETVTFHDKRVKY-RTGEEAFSTKLHLILTNIQMGVVEDKKGWMMEI 354          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 7.426e-24
Identity = 59/121 (48.76%), Postives = 78/121 (64.46%), Query Frame = -1
Query:  271 LEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLELS 633
            +EEVS+ NIF+VKGN I TP   GTIL GITRKSII++A   G++            +A+EVFCTGTA  V+ VGSIT+   R  Y + G G V+QQL S+L  +Q G I D  +W L+++
Sbjct:  265 IEEVSAANIFLVKGNTIVTPATSGTILGGITRKSIIEIALDLGYKVEERSVPVEELKEAEEVFCTGTAAGVASVGSITFKNTRTEY-KVGDGIVTQQLRSILVGIQTGSIQDTKDWVLQIA 384          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.548e-21
Identity = 47/120 (39.17%), Postives = 77/120 (64.17%), Query Frame = -1
Query:  274 LEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 633
            +EE+ + N+F++KGNV+STP I GTILPG+TR  ++++ +  G+Q           LDADE FCTGTA +V+ + S+T+  K+  + + G   ++ +LY  L+ +Q G + D   WT+E+
Sbjct:  232 IEELFAANVFMLKGNVVSTPTIAGTILPGVTRNCVMELCRDFGYQVEERTIPLVDFLDADEAFCTGTASIVTSIASVTFKDKKTGF-KTGEETLAAKLYETLSDIQTGRVEDTKGWTVEI 350          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = -1
Query:  274 KRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 642
            ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++            +A       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY   T +Q G + DK  W +E+
Sbjct:  227 QKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEV 355          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: ILVE_STAEQ (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 49/129 (37.98%), Postives = 74/129 (57.36%), Query Frame = -1
Query:  274 KRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNWTLEL 642
            ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++            +A       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY   T +Q G + DK  W +E+
Sbjct:  227 QKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEV 355          
BLAST of DN617957 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.193e-19
Identity = 48/125 (38.40%), Postives = 74/125 (59.20%), Query Frame = -1
Query:  286 KRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGLIADKMNW 642
            ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  227 QKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
The following BLAST results are available for this feature:
BLAST of DN617957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
BCAT3_ARATH3.098e-4675.81Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT5_ARATH1.102e-4371.77Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT2_ARATH3.677e-3155.65Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT6_ARATH4.207e-2748.36Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT7_ARATH7.176e-2749.17Putative branched-chain-amino-acid aminotransferas... [more]
BCAT1_ARATH7.426e-2448.76Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT4_ARATH1.548e-2139.17Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAES4.217e-1937.98Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAEQ4.217e-1937.98Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAW7.193e-1938.40Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01O17_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001O17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617957 ID=DN617957; Name=DN617957; organism=Citrus sinensis; type=EST; length=642bp
CACTTCACTTTCACTTTATTTATATGTACCCAAGTGTAGCCAAATGGGAT
GCGGGATGTACTAAGTGGAACATACCCAGCAACAAATATTTCTCATAGTA
ACTTGAGAACAAATTTGAATATCAAACATAAAGAAGGCAGCAAACTAAAG
AAATCTGAGTCACCACCGTATATTTAGACCCGCCAACAGCTCAGTCCAAG
GATCAGTGAACCTATGAGAGATGGACAGATTTGAAATGCAAACCAGAACC
AGTAACTTAACCATGATCTAGCTGAGCTCAAGGGTCCAATTCATCTTGTC
CGCTATAAGACCCATCTGTAGTTGGGTAAGCACGGAATATAATTGCTGTG
ACACCGCACCGAAACCACCCTCCCCGTAGGATACCCTTTTACCAAGATAA
GTGATGCTTCCCACAGGAGATACAACAACAGCTGTACCAGTACAAAAAAC
TTCATCAGCATCAAGTAACTCCTCCACTGTCACAAGGCGTTCCTCAACCT
GGAACCCTTGGCTTTGAGCAACATCAATTATACTCTTTCTTGTAATGCCA
GGTAAGATAGTTCCTTTTATCACAGGAGTGGATATAACATTGCCCTTCAC
GACAAAAATGTTGCAAGAGGAAACCTCTTCCAGGTATCTCTT
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