DN617947

Overview
NameDN617947
Unique NameDN617947
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5826 contig Csv1_Contig5826:1047..1654. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.328e-56
Identity = 101/183 (55.19%), Postives = 133/183 (72.68%), Query Frame = -2
Query:   56 LLVWTMVLLCIHPEWQERAREEVCQVFGNREPKFEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQLSPTYMHAPTRGVTVYPQHGANIILHKI 604
            LL WT +LL  HPEWQERAREEV Q FG  +P+FE LN LK VS ILYEVLRLY P   LT+   K+ KLG   IP G  + LP +++H +   WG+DA +FNP RF +GV+ A+KN +++  F WGPR+C+GQNFALL++KL LAMILQ+F F ++P+Y+HAP   +TV PQ G+++I  K+
Sbjct:  340 LLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIVHKDTKLGSYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFVDGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKL 522          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3AV_MESAU (Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CYP3A31 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.255e-22
Identity = 54/157 (34.39%), Postives = 94/157 (59.87%), Query Frame = -2
Query:  140 SLLVWTMVLLCIHPEWQERAREEVCQVFGNR-EPKFEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 607
            S L + + LL  HP+ Q++ +EE+     N+  P ++++ +++ +  +L E LRLY     L R   +++++  + +P G ++ +P+  +H+D +YW  + +KF P+RFS+  +K S +   F  FG GPR CIG  FAL+  KLAL  +LQ F+ Q
Sbjct:  310 STLSFALYLLATHPDVQKKLQEEIDIALPNKARPSYDKVMEMEYLDMVLNETLRLYPIGSRLERVCKQDVEMDGVFVPKGSIVMVPVFALHYDPQYW-PEPEKFRPERFSK-ENKGSIDPYIFLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSLQ 464          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3AC_CANFA (Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A12 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.140e-22
Identity = 56/155 (36.13%), Postives = 90/155 (58.06%), Query Frame = -2
Query:  140 LVWTMVLLCIHPEWQERAREEVCQVFGNRE-PKFEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 601
            L + M  L  HP+ Q++ +EE+   F N+  P ++ L Q++ +  +L E LRLY  A  L R   K++++  + IP G ++ +P   +H D   W  + ++F P+RFS   +K S N  ++  FG GPR CIG  FA++  KLAL  +LQ F+F+
Sbjct:  314 LSFLMYELATHPDVQQKLQEEIDATFPNKALPTYDALVQMEYLDMVLNETLRLYPIAGRLERVCKKDVEISGVFIPKGTVVMVPTFTLHRDQSLW-PEPEEFRPERFSRK-NKDSINPYTYLPFGTGPRNCIGMRFAIMNMKLALVRVLQNFSFK 466          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3AT_PIG (Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22
Identity = 53/148 (35.81%), Postives = 91/148 (61.49%), Query Frame = -2
Query:  140 LCIHPEWQERAREEVCQVFGNREPK-FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 580
            L  HP+ Q++ +EE+   F N+ P  ++ L Q++ +  ++ E LRLY  A  L RA  K++++  + +P G ++ +P+ ++H D + W  + ++F P+RFS+   K + N  ++  FG GPR CIG  FAL+  KLAL  +LQ F+F+
Sbjct:  321 LATHPDVQQKLQEEIEATFPNKAPPTYDALAQMEYLDMVVNETLRLYPIAARLERACKKDVEIHGVFVPKGTVVVVPVFVLHRDPDLW-PEPEEFRPERFSK-KHKDTINPYTYLPFGTGPRNCIGMRFALMNMKLALVRVLQNFSFK 466          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3AG_MOUSE (Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22
Identity = 56/157 (35.67%), Postives = 94/157 (59.87%), Query Frame = -2
Query:  140 SLLVWTMVLLCIHPEWQERAREEVCQVFGNREPK-FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 607
            S+L +T+  L  HP+ Q++ +EE+ +   N+ P  ++ +  ++ +  +L E LRLY     L R   K++++  I IP G  + +P  ++HHD ++W  + ++F P+RFS+  +K S +   +  FG GPR CIG  FAL+  KLAL  +LQ F+FQ
Sbjct:  313 SILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHW-PEPEEFQPERFSKE-NKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQ 467          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP4FC_HUMAN (Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.651e-22
Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = -2
Query:  143 LVWTMVLLCIHPEWQERAREEVCQVFGNREPK---FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGE-IVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTF 601
            L W +  L  HPE+QER R+EV ++  +R+PK   +++L QL  ++  + E LRL+ PAP ++R   ++I L +  VIP G+   + I+ VHH+   W  D + ++P RF    SK  ++ ++F  F  GPR CIGQ FA+ E K+ LA++L  F F
Sbjct:  337 LSWVLYNLARHPEYQERCRQEVQELLKDRDPKEIEWDDLAQLPFLTMCVKESLRLHPPAPFISRCCTQDIVLPDGRVIPKGITCLIDIIGVHHNPTVW-PDPEVYDPFRFDPENSKG-RSPLAFIPFSAGPRNCIGQAFAMAEMKVVLALMLLHFRF 491          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3AB_MOUSE (Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.651e-22
Identity = 55/157 (35.03%), Postives = 94/157 (59.87%), Query Frame = -2
Query:  140 SLLVWTMVLLCIHPEWQERAREEVCQVFGNREPK-FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 607
            S L +T+  L  HP+ Q++ ++E+ +   N+ P  ++ + +++ +  +L E LRLY  A  L R   K+++L  + IP G  + +P   +HHD ++W  + ++F P+RFS+  +K S +   +  FG GPR C+G  FAL+  KLAL  I+Q F+FQ
Sbjct:  313 STLSFTLHSLATHPDIQKKLQDEIDEALPNKAPPTYDTVMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHW-SEPEEFQPERFSK-ENKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQ 467          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3A5_HUMAN (Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.768e-22
Identity = 55/157 (35.03%), Postives = 95/157 (60.51%), Query Frame = -2
Query:  140 SLLVWTMVLLCIHPEWQERAREEVCQVFGNREPK-FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 607
            S+L +T+  L  HP+ Q++ ++E+  V  N+ P  ++ + Q++ +  ++ E LRL+  A  L R   K++++  + IP G ++ +P   +HHD +YW  + ++F P+RFS+   K S +   +  FG GPR CIG  FAL+  KLAL  +LQ F+F+
Sbjct:  312 SVLSFTLYELATHPDVQQKLQKEIDAVLPNKAPPTYDAVVQMEYLDMVVNETLRLFPVAIRLERTCKKDVEINGVFIPKGSMVVIPTYALHHDPKYW-TEPEEFRPERFSK--KKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 465          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3AL_CALJA (Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3A21 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.133e-22
Identity = 56/157 (35.67%), Postives = 95/157 (60.51%), Query Frame = -2
Query:  140 SLLVWTMVLLCIHPEWQERAREEVCQVFGNREPK-FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 607
            S L + M  L  HP+ Q++ +EE+  V  N+ P  ++ + Q++ +  ++ E LRL+  A  L R   K++++  + IP GV++ +P   +H+D +YW  + +KF P+RFS+  +K + +   +  FG GPR CIG  FAL+  KLAL  +LQ F+F+
Sbjct:  312 STLSFIMYELATHPDVQQKLQEEIDAVLPNKAPATYDTVLQMEYLDMVVNETLRLFPLAMRLERVCKKDVEINGVFIPKGVVVMIPSYALHYDPKYW-TEPEKFLPERFSKN-NKDNIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFSFK 466          
BLAST of DN617947 vs. ExPASy Swiss-Prot
Match: CP3A7_HUMAN (Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 8.133e-22
Identity = 56/157 (35.67%), Postives = 97/157 (61.78%), Query Frame = -2
Query:  140 SLLVWTMVLLCIHPEWQERAREEVCQVFGNREPK-FEELNQLKAVSQILYEVLRLYSPAPLLTRANVKEIKLGEIVIPPGVLLSLPIMLVHHDHEYWGDDAKKFNPDRFSEGVSKASKNQISFFSFGWGPRICIGQNFALLESKLALAMILQKFTFQ 607
            S+L + +  L  HP+ Q++ ++E+  V  N+ P  ++ + QL+ +  ++ E LRL+  A  L R   K++++  + IP GV++ +P  ++HHD +YW  + +KF P+RFS+  +K + +   +  FG GPR CIG  FAL+  KLAL  +LQ F+F+
Sbjct:  312 SVLSFIIYELATHPDVQQKVQKEIDTVLPNKAPPTYDTVLQLEYLDMVVNETLRLFPVAMRLERVCKKDVEINGMFIPKGVVVMIPSYVLHHDPKYW-REPEKFLPERFSK-KNKDNIDPYIYTPFGSGPRNCIGMRFALVNMKLALVRVLQNFSFK 466          
The following BLAST results are available for this feature:
BLAST of DN617947 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 333
Match NameE-valueIdentityDescription
C72A1_CATRO1.328e-5655.19Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
CP3AV_MESAU1.255e-2234.39Cytochrome P450 3A31 OS=Mesocricetus auratus GN=CY... [more]
CP3AC_CANFA2.140e-2236.13Cytochrome P450 3A12 OS=Canis familiaris GN=CYP3A1... [more]
CP3AT_PIG2.795e-2235.81Cytochrome P450 3A29 OS=Sus scrofa GN=CYP3A29 PE=2... [more]
CP3AG_MOUSE2.795e-2235.67Cytochrome P450 3A16 OS=Mus musculus GN=Cyp3a16 PE... [more]
CP4FC_HUMAN3.651e-2238.85Cytochrome P450 4F12 OS=Homo sapiens GN=CYP4F12 PE... [more]
CP3AB_MOUSE3.651e-2235.03Cytochrome P450 3A11 OS=Mus musculus GN=Cyp3a11 PE... [more]
CP3A5_HUMAN4.768e-2235.03Cytochrome P450 3A5 OS=Homo sapiens GN=CYP3A5 PE=1... [more]
CP3AL_CALJA8.133e-2235.67Cytochrome P450 3A21 OS=Callithrix jacchus GN=CYP3... [more]
CP3A7_HUMAN8.133e-2235.67Cytochrome P450 3A7 OS=Homo sapiens GN=CYP3A7 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01O12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617947 ID=DN617947; Name=DN617947; organism=Citrus sinensis; type=EST; length=608bp
CTACATATACTATATGGGCATGAATTCTGAATACTTGCGATAGTAATGCA
TACTAAATTTTGTGTAAAATGATATTAGCACCATGCTGTGGATATACAGT
TACCCCACGAGTAGGAGCATGCATATAAGTTGGTGAAAGCTGGAAAGTGA
ACTTCTGCAAAATCATTGCTAAAGCTAATTTCGATTCCAACAGAGCAAAG
TTTTGTCCAATGCAGATTCGAGGACCCCAACCAAATGAGAAGAATGAAAT
TTGATTCTTCGATGCCTTTGAGACTCCCTCTGAAAACCTATCTGGGTTGA
ACTTTTTTGCATCATCGCCCCAGTATTCATGATCATGATGAACAAGCATT
ATTGGCAATGAAAGTAAAACTCCAGGTGGTATAACAATTTCTCCTAGCTT
AATCTCCTTAACATTAGCTCGAGTAAGCAGAGGTGCTGGTGAATATAACC
TCAATACCTCGTACAGAATTTGGCTTACTGCTTTCAACTGGTTCAGCTCT
TCAAATTTTGGTTCTCTATTTCCAAAAACTTGACAAACCTCTTCCCTTGC
TCGTTCTTGCCATTCAGGATGTATGCATAACAAAACCATTGTCCACACAA
GCAATGAT
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