DN617935

Overview
NameDN617935
Unique NameDN617935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length529
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13846 contig Csv1_Contig13846:29..556. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 2.352e-50
Identity = 103/134 (76.87%), Postives = 112/134 (83.58%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG----ASMDEDXXXXXXXXXXXPKIEEVD 528
            EIEKMVQEAEKYK+ED+EHKKKVEAKNALENYAYNMRNTI+DEKI  KLP ADKKKIED+IE+AIQWL+GNQLAEADEFEDKMKELE ICNPIIAKMYQG G +AG    + MD+D           PKIEEVD
Sbjct:  520 EIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAGGPGASGMDDD--APPASGGAGPKIEEVD 651          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 6.844e-50
Identity = 103/135 (76.30%), Postives = 112/135 (82.96%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG-GADAG----ASMDEDXXXXXXXXXXXPKIEEVD 528
            +IEKMVQEAEKYK+ED+EHKKKVEAKNALENYAYNMRNTI+DEKI  KLP ADKKK+ED+IEEAIQWLDGNQL EADEFEDKMKELE +CNPIIAKMYQGG G +AG    + MDED           PKIEEVD
Sbjct:  520 DIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGGPGASGMDED-EAPPASGGAGPKIEEVD 653          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 5.794e-49
Identity = 98/130 (75.38%), Postives = 108/130 (83.08%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXPKIEEVD 528
            EIEKMVQEAEKYKAED+E KKKVEAKN+LENYAYNMRNT+KDEKI +KL + DKKKIEDA+++AI WL+ NQLAE DEFEDKMKELEGICNPIIAKMYQG G DAG  MD+D           PKIEEVD
Sbjct:  522 EIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDD-APPSGGSSAGPKIEEVD 650          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 4.905e-48
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = -2
Query:  193 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDED 528
            EIEKMVQEAEKYK+ED+EHKKKVE+KNALENYAYNMRN +KDEKI AKL  ADKKKIE+AI+ +IQWLDGNQLAEADEF+DKMKELE ICNPIIAKMYQG G D G  M+++
Sbjct:  520 EIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDMGGGMEDE 631          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.427e-47
Identity = 97/130 (74.62%), Postives = 106/130 (81.54%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXPKIEEVD 528
            EIEKMVQEAEKYK+ED+EHKKKVEAKNALENYAYNMRNTIKDEKI++KL   D+ KIEDAIE+AIQWLDGNQLAEA+EFEDKMKELE +CNPIIAKMYQG G D      +D           PKIEEVD
Sbjct:  520 EIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQGAGGDM-----DDEGPAPSGGGAGPKIEEVD 644          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 1.864e-47
Identity = 96/130 (73.85%), Postives = 105/130 (80.77%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXPKIEEVD 528
            EIEKMVQEAEKYKAED+E KKKV+AKNALENYAYNMRNTIKD+KI++KLP  DKKKIEDA++ AI WLD NQLAE +EFEDKMKELEGICNPIIAKMY G GA  GA+   D           PKIEEVD
Sbjct:  516 EIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 5.423e-47
Identity = 99/134 (73.88%), Postives = 110/134 (82.09%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDED----XXXXXXXXXXXPKIEEVD 528
            EIE+MVQEAEKYK+ED+E KKKVEAKNALENYAYNMRNTIKD+KI+++L  ADKK+IEDAI+EAI+WLD NQLAEADEFEDKMKELE ICNPIIAKMYQGG    GA+MDED               PKIEEVD
Sbjct:  520 EIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGA--GGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.578e-46
Identity = 98/132 (74.24%), Postives = 105/132 (79.55%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG--GADAGASMDEDXXXXXXXXXXXPKIEEVD 528
            EIEKMVQEAEKYK+ED+EHKKKV+AKNALENYAYNMRNTI+DEKI  KL   DKKKIED+IE AI+WL+ NQLAE DEFEDKMKELE ICNPIIAKMYQGG  G  A   MDED           PKIEEVD
Sbjct:  520 EIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAGGMDED--VPPSAGGAGPKIEEVD 649          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.058e-42
Identity = 90/130 (69.23%), Postives = 101/130 (77.69%), Query Frame = -2
Query:  139 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXPKIEEVD 528
            EIEKMV++AE+YKAED+E KKKVEAKN+LENYAYNMRNTIKDEKI  KL   +K+KIE A+E+AIQWL+GNQ+AE DEFEDK KELEGICNPIIAKMYQG    AG   D             PKIEEVD
Sbjct:  519 EIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQGA---AGPGGDVPMGADMPAAGAGPKIEEVD 645          
BLAST of DN617935 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.764e-40
Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = -2
Query:  223 EIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 528
            EIEK+V+EAEKYKAED+E KKKVEAKNALENYAYNMRNTIKD+KI  KL   DK+KIE A+ EAI+WL+ NQLAE DE EDK+KELEG+CNPIIA++YQG G
Sbjct:  522 EIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVDELEDKLKELEGLCNPIIARLYQGRG 623          
The following BLAST results are available for this feature:
BLAST of DN617935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
HSP71_ARATH2.352e-5076.87Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH6.844e-5076.30Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC5.794e-4975.38Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7E_SPIOL4.905e-4880.36Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC1.427e-4774.62Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP70_MAIZE1.864e-4773.85Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP7C_PETHY5.423e-4773.88Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH1.578e-4674.24Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_SOYBN1.058e-4269.23Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA3.764e-4076.47Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01O06_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617935 ID=DN617935; Name=DN617935; organism=Citrus sinensis; type=EST; length=529bp
TTAAAAACATAATATTCTTTATGCATACACCAGGAAACAGTATTTACATG
TAACAGAAGCAGGAAAAGGAAGAAAAGATCACACTCCCAACTCAACCCCT
AATCATTAAACAACATTAAGCATAAATCCTCAAATTTAATCCACCTCCTC
AATCTTGGGGCCAGCACCGCTACCAGCACCAGCAGAAGGACCATCCTCAT
CCATACTTGCACCAGCATCAGCTCCACCTCCTTGGTACATCTTGGCAATA
ATTGGGTTGCAGATGCCCTCCAGCTCTTTCATCTTATCTTCAAACTCATC
TGCCTCTGCGAGCTGGTTCCCGTCAAGCCATTGGATGGCCTCCTCAATGG
CATCTTCAATTTTCTTCTTGTCAGCAGTGGGAAGCTTTGCGCTGATCTTT
TCATCCTTGATTGTGTTTCTCATGTTGTAAGCATAATTCTCAAGAGCATT
CTTGGCCTCCACCTTTTTCTTGTGCTCGTCATCCTCGGCCTTGTATTTTT
CTGCCTCTTGTACCATCTTCTCTATCTCC
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