DN617929

Overview
NameDN617929
Unique NameDN617929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NARGL_HUMAN (NMDA receptor-regulated 1-like protein OS=Homo sapiens GN=NARG1L PE=1 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 4.492e-56
Identity = 103/152 (67.76%), Postives = 124/152 (81.58%), Query Frame = 3
Query:  129 LPSKDANLFKLIVKSYETKQYKKGLKAADAILK--KFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            LP K++NLFK I+K YE KQYK GLK    IL   KF EHGETL+MKGLTLNC+ +K EAYE VR G++ND+KSHVCWHVYGLL RSD++Y EAIKCYRNAL++D DN++ILRDLSLLQ QMRDL G+ ETR QLL L+P  R +WIG+A++
Sbjct:    6 LPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLGKKEEAYEFVRKGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIA 157          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NARG1_PONAB (NMDA receptor-regulated protein 1 OS=Pongo abelii GN=NARG1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.491e-54
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 3
Query:  126 SLPSKDANLFKLIVKSYETKQYKKGLKAADAILK--KFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            SLP K+  LFK I++ YE KQY+ GLK    IL   KF EHGETL+MKGLTLNC+ +K EAYELVR G++ND+KSHVCWHVYGLL RSD++Y EAIKCYRNAL+ D DN++ILRDLSLLQ QMRDL G+ ETR QLL L+P  R +WIG+A++
Sbjct:    5 SLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIA 157          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NARG1_MOUSE (NMDA receptor-regulated protein 1 OS=Mus musculus GN=Narg1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.491e-54
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 3
Query:  126 SLPSKDANLFKLIVKSYETKQYKKGLKAADAILK--KFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            SLP K+  LFK I++ YE KQY+ GLK    IL   KF EHGETL+MKGLTLNC+ +K EAYELVR G++ND+KSHVCWHVYGLL RSD++Y EAIKCYRNAL+ D DN++ILRDLSLLQ QMRDL G+ ETR QLL L+P  R +WIG+A++
Sbjct:    5 SLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIA 157          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NARG1_HUMAN (NMDA receptor-regulated protein 1 OS=Homo sapiens GN=NARG1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.491e-54
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 3
Query:  126 SLPSKDANLFKLIVKSYETKQYKKGLKAADAILK--KFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            SLP K+  LFK I++ YE KQY+ GLK    IL   KF EHGETL+MKGLTLNC+ +K EAYELVR G++ND+KSHVCWHVYGLL RSD++Y EAIKCYRNAL+ D DN++ILRDLSLLQ QMRDL G+ ETR QLL L+P  R +WIG+A++
Sbjct:    5 SLPPKENALFKRILRCYEHKQYRNGLKFCKQILSNPKFAEHGETLAMKGLTLNCLGKKEEAYELVRRGLRNDLKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKWDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPAQRASWIGYAIA 157          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NARGL_MOUSE (NMDA receptor-regulated 1-like protein OS=Mus musculus GN=Narg1l PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 2.725e-53
Identity = 97/152 (63.82%), Postives = 123/152 (80.92%), Query Frame = 3
Query:  129 LPSKDANLFKLIVKSYETKQYKKGLKAADAILK--KFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            LP+K++ LFK ++K YE KQYK GLK    IL   KF EHGETL+MKGL LNC+ ++ EAYE VR G+++D++SHVCWHVYGLL RSD++Y EAIKCYRNAL++D DN++ILRDLSLLQ QMRDL G+ ETR QLL L+P  R +WIG+A++
Sbjct:    6 LPAKESALFKRVLKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLILNCLGKREEAYEFVRKGLRSDVRSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQLLQLRPTQRASWIGYAIA 157          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NAT1_SCHPO (N-terminal acetyltransferase A complex subunit nat1 OS=Schizosaccharomyces pombe GN=nat1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 5.517e-38
Identity = 71/150 (47.33%), Postives = 105/150 (70.00%), Query Frame = 3
Query:  129 LPSKDANLFKLIVKSYETKQYKKGLKAADAILKKFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            L  K+  LF+  +K YETKQYKKGLKA + +L++ PEHGE+L++KG+ L+ +    E Y+ VRLG++ND+ S VCWH++GL+ R+D++Y +A KCY NA +++ +N  +LRDL+LLQ+Q+R      +TR  LL   P  R NW   AV+
Sbjct:    6 LSPKEITLFRTALKCYETKQYKKGLKAIEPLLERHPEHGESLAIKGILLHSLGNTKEGYDNVRLGLRNDVGSGVCWHIFGLISRADKDYVQAAKCYINAHKLEKNNSSLLRDLALLQSQLRQYKALADTRNALLQDNPGVRANWSALAVA 155          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: NAT1_YEAST (N-terminal acetyltransferase A complex subunit NAT1 OS=Saccharomyces cerevisiae GN=NAT1 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  138 KDANLFKLIVKSYETKQYKKGLKAADAILKKFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKN---DIKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            K+ + F   +K YE KQYKK LK  DAILKK   H ++L++KGL L  +  K +A   V   ++       S +C HV G+  R+ +EY+E+IK +  AL     N +I RDL+ LQ+Q+ D    + +R++       +R NW   AV+
Sbjct:   19 KENDQFLEALKLYEGKQYKKSLKLLDAILKKDGSHVDSLALKGLDLYSVGEKDDAASYVANAIRKIEGASASPICCHVLGIYMRNTKEYKESIKWFTAALNNGSTNKQIYRDLATLQSQIGDFKNALVSRKKYWEAFLGYRANWTSLAVA 168          
BLAST of DN617929 vs. ExPASy Swiss-Prot
Match: YOP2_SCHPO (N-terminal acetyltransferase A complex subunit-like protein C418.02 OS=Schizosaccharomyces pombe GN=SPBC418.02 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17
Identity = 50/154 (32.47%), Postives = 83/154 (53.90%), Query Frame = 3
Query:  123 ASLPSKDANLFKLIVKSYETKQYKKGLKAADAILKKFPEHGETLSMKGLTLNCMDRKSEAYELVRLGVKNDI--KSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVS 578
            + L  K+A LF   +  +E  QY K LK   ++LKK P+H +++++ GL L  +     A  L++ G  + I  KS  CWH   ++YR  ++Y  ++KCY+NAL I P+N  +  D + LQAQ+       +   +LL L  ++    + F +S
Sbjct:    2 SKLSEKEAFLFDRSIDQFEKGQYSKSLKTIQSVLKKKPKHPDSVALLGLNLCKLHDSRSA--LLKCGYASSIDPKSQFCWHALAIVYRETKDYNNSLKCYQNALAISPNNESLWYDAAYLQAQLGLYQPLFDNWNRLLQLDSSNLEYRLCFTLS 153          
The following BLAST results are available for this feature:
BLAST of DN617929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
NARGL_HUMAN4.492e-5667.76NMDA receptor-regulated 1-like protein OS=Homo sap... [more]
NARG1_PONAB5.491e-5466.67NMDA receptor-regulated protein 1 OS=Pongo abelii ... [more]
NARG1_MOUSE5.491e-5466.67NMDA receptor-regulated protein 1 OS=Mus musculus ... [more]
NARG1_HUMAN5.491e-5466.67NMDA receptor-regulated protein 1 OS=Homo sapiens ... [more]
NARGL_MOUSE2.725e-5363.82NMDA receptor-regulated 1-like protein OS=Mus musc... [more]
NAT1_SCHPO5.517e-3847.33N-terminal acetyltransferase A complex subunit nat... [more]
NAT1_YEAST7.491e-1936.67N-terminal acetyltransferase A complex subunit NAT... [more]
YOP2_SCHPO1.845e-1732.47N-terminal acetyltransferase A complex subunit-lik... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01O02_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001O02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617929 ID=DN617929; Name=DN617929; organism=Citrus sinensis; type=EST; length=580bp
CTCATTCTCTTTCTCTCTTTTAGCTTATTGTTCACAGTAGGGTAGGGTTG
CAGCAGATAAACGCCACCACCGTCACCGCCACCACCGCCGCTCTTTCTCT
CTCAAACACCATCACAATGGGCGCCTCTCTTCCTTCCAAAGACGCCAATC
TCTTTAAACTCATCGTCAAATCATATGAAACTAAACAGTATAAGAAGGGA
CTGAAAGCGGCTGATGCTATATTGAAAAAGTTTCCTGAACATGGAGAAAC
ACTATCGATGAAAGGCTTGACGTTAAATTGCATGGACCGTAAATCTGAAG
CATATGAGCTTGTCCGTCTCGGGGTGAAGAATGACATCAAAAGTCATGTT
TGCTGGCATGTATACGGTCTCTTGTATCGATCCGACAGAGAATATAGAGA
AGCAATCAAATGCTATCGTAATGCTCTGAGGATAGATCCAGACAACATTG
AAATACTGCGGGACCTGTCACTGTTGCAGGCACAAATGCGGGATTTGACA
GGATTTGTTGAGACTAGGCAACAACTTCTGACTTTAAAACCGAATCATCG
CATGAACTGGATTGGGTTTGCAGTCTCCCA
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