DN617926

Overview
NameDN617926
Unique NameDN617926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617926 vs. ExPASy Swiss-Prot
Match: P2C23_ARATH (Probable protein phosphatase 2C 23 OS=Arabidopsis thaliana GN=PLL4 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 3.538e-45
Identity = 109/175 (62.29%), Postives = 122/175 (69.71%), Query Frame = 2
Query:    5 NAGPIFPGNYNSGPLERGFLSGPIERGFLSGPLDRGGLFSGPIEKDSSVPDRFQRSFSHSSFILRPRSRKTSLIRVLQRAISKTISRGQNLNSIVAPIKGVASVKEPEWVFASDKNQ-NDNSNNLTVXXXXXXXXXXXXXXX-----QNLQWAQGKAGEDRVHVVVSEEHGWVFV 511
            ++GPI PG   SGPLERGFLSGPIERGF+SGPLD     SGPI+  +   D+FQRSFSH    LR  SRK SL+RVL+RAISKTI+RGQN  SIVAPIK    VKEP+WVF SDK + +   NNLTV                    QNLQWAQGKAGEDRVHVVVSEEHGW+FV
Sbjct:  114 SSGPIVPG---SGPLERGFLSGPIERGFMSGPLDGS---SGPIDGKTG-SDQFQRSFSHGLANLRVGSRKGSLVRVLRRAISKTITRGQN--SIVAPIK---PVKEPDWVFGSDKTRIHQIENNLTVNSLNFSSEGSLLDDDVSLESQNLQWAQGKAGEDRVHVVVSEEHGWLFV 276          
BLAST of DN617926 vs. ExPASy Swiss-Prot
Match: P2C04_ARATH (Probable protein phosphatase 2C 4 OS=Arabidopsis thaliana GN=PLL5 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 2.293e-44
Identity = 106/175 (60.57%), Postives = 126/175 (72.00%), Query Frame = 2
Query:    5 NAGPIFPGNYNSGPLERGFLSGPIERGFLSGPLDRGGLFSGPIEK-DSSVPDRFQRSFSHSSFILRPRSRKTSLIRVLQRAISKTISRGQNLNSIVAPIKGVASVKEPE-WVFASDKNQNDNSNNLTV----XXXXXXXXXXXXXXXQNLQWAQGKAGEDRVHVVVSEEHGWVFV 511
            ++GPI  G   SGP+ERGFLSGPIERGF+SGPLDR GLFSGP++K +S    +FQRSFSH    LR  SRK SL+R+L+RAISKT+SRGQ  NSIVAPIK   SVK+ + W   S+K++N ++ NLTV                   QNLQWAQGKAGEDRVHVVVSEEHGW+FV
Sbjct:  117 SSGPIVLG---SGPIERGFLSGPIERGFMSGPLDRVGLFSGPLDKPNSDHHHQFQRSFSH-GLALRVGSRKRSLVRILRRAISKTMSRGQ--NSIVAPIK---SVKDSDNWGIRSEKSRNLHNENLTVNSLNFSSEVSLDDDVSLENQNLQWAQGKAGEDRVHVVVSEEHGWLFV 282          
BLAST of DN617926 vs. ExPASy Swiss-Prot
Match: P2C66_ARATH (Probable protein phosphatase 2C 66 OS=Arabidopsis thaliana GN=PLL2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.237e-15
Identity = 58/168 (34.52%), Postives = 83/168 (49.40%), Query Frame = 2
Query:   32 YNSGPL--ERGFLSGPIERGFLSGPLDRGGLFSGPIEKDSSVPDRFQRSFSHSSFILRPRSRKTSL-IRVLQRAISKTISRGQNLNSIVAPIKGVAS-----VKEPEWVFASDKNQNDNSNNLTVXXXXXXXXXXXXXXXQNLQWAQGKAGEDRVHVVVSEEHGWVFV 511
            + SGP+  E G  S P ER FLSGP++  GL+SGPIE          +         +P+S+K  L  + L   +    ++ +   S++ PI G  S     +     + +S  N+N  S+                    ++QWAQGKAGEDRVHVVVSE++GWVFV
Sbjct:  123 WQSGPIVNESGLGSAPFERRFLSGPIE-SGLYSGPIESTKKTEKEKPKKIRK-----KPKSKKNFLTFKTLFANLISNNNKPRLKKSVIEPINGSDSSDSGRLHHEPVITSSRSNENPKSD------LEEEDEKQSMNSVLDVQWAQGKAGEDRVHVVVSEDNGWVFV 278          
The following BLAST results are available for this feature:
BLAST of DN617926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
P2C23_ARATH3.538e-4562.29Probable protein phosphatase 2C 23 OS=Arabidopsis ... [more]
P2C04_ARATH2.293e-4460.57Probable protein phosphatase 2C 4 OS=Arabidopsis t... [more]
P2C66_ARATH2.237e-1534.52Probable protein phosphatase 2C 66 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01N24_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617926 ID=DN617926; Name=DN617926; organism=Citrus sinensis; type=EST; length=511bp
GATCAACGCCGGTCCCATTTTTCCGGGTAACTACAATTCTGGTCCGTTGG
AAAGAGGGTTTCTTTCGGGTCCAATTGAGAGAGGGTTCTTATCGGGTCCT
CTCGACCGCGGCGGGTTGTTTTCCGGTCCGATTGAAAAGGATAGCTCCGT
CCCTGACCGGTTCCAACGAAGCTTCTCACATTCGAGTTTTATTCTCCGGC
CCAGATCAAGAAAAACGTCGCTGATTCGGGTCCTGCAAAGGGCAATATCC
AAGACAATCTCTCGCGGCCAGAATTTGAACTCAATCGTAGCCCCGATTAA
AGGAGTGGCTTCGGTTAAAGAACCCGAATGGGTTTTCGCGTCGGATAAGA
ACCAAAACGACAACAGCAACAACTTGACAGTGAGTAGCGACGGTAGTTTA
TTGGAAGACGATGATTCTTTAGAGAGTCAAAATCTTCAATGGGCTCAGGG
TAAAGCTGGCGAAGATCGTGTACACGTCGTCGTTTCGGAGGAACACGGTT
GGGTTTTTGTT
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