DN617924

Overview
NameDN617924
Unique NameDN617924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7795 contig Csv1_Contig7795:131..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617924 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.679e-40
Identity = 83/85 (97.65%), Postives = 83/85 (97.65%), Query Frame = -1
Query:  326 VELSKMVVIVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTHEDCTTSDIRSSLEQLGLLKV 580
            VELSKMVV VGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQT EDCTTSDIRSSLEQLGLLKV
Sbjct:  973 VELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057          
BLAST of DN617924 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.686e-26
Identity = 51/84 (60.71%), Postives = 73/84 (86.90%), Query Frame = -1
Query:  329 VELSKMVVIVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTHEDCTTSDIRSSLEQLGLLK 580
            ++LSK+VV VGESGDTDYEGL+GG+ K VI+KG+C+++S+ IH NR+YPLSDV+P DSPN++Q  E+C++++IR  LE+L +LK
Sbjct:  969 MDLSKLVVFVGESGDTDYEGLIGGLRKAVIMKGLCTNASSLIHGNRNYPLSDVLPFDSPNVIQADEECSSTEIRCLLEKLAVLK 1052          
BLAST of DN617924 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.082e-25
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = -1
Query:  329 ELSKMVVIVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTHEDCTTSDIRSSLEQLGLLK 577
            ELSKMVV VGE GDTDYEGL+GG+HK+VILKG+ S + +Q+H NR+YPLSDVMP+DSPNIVQ  E  +++DI++ LE++G  K
Sbjct:  976 ELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRAISQLHNNRNYPLSDVMPLDSPNIVQATEGSSSADIQALLEKVGYHK 1058          
BLAST of DN617924 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.515e-24
Identity = 51/85 (60.00%), Postives = 71/85 (83.53%), Query Frame = -1
Query:  329 VELSKMVVIVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTH-EDCTTSDIRSSLEQLGLLK 580
            +ELSK VV+VGESGDTDYE +LGGVHKTV+L G+C++++N +HANRSYPL+DV+  D  NI +TH E+C+++D+R+ LE+ G  K
Sbjct:  969 MELSKTVVVVGESGDTDYEEMLGGVHKTVVLSGVCTTATNLLHANRSYPLADVVCFDDLNIFKTHNEECSSTDLRALLEEHGAFK 1053          
BLAST of DN617924 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.886e-23
Identity = 51/80 (63.75%), Postives = 66/80 (82.50%), Query Frame = -1
Query:  341 VELSKMVVIVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTHEDCTTSDIRSSLEQL 580
            VELSKMVV VGE GDTDYEGLLGGVHKTVILKG+ +++   +HANRSYPLS V+ +DSPNI +  + C++S+I+S + +L
Sbjct:  963 VELSKMVVFVGECGDTDYEGLLGGVHKTVILKGVSNTALRSLHANRSYPLSHVVSLDSPNIGEVSKGCSSSEIQSIVTKL 1042          
BLAST of DN617924 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 8.657e-23
Identity = 56/87 (64.37%), Postives = 65/87 (74.71%), Query Frame = -1
Query:  320 VELSKMVVIVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTHEDCTTSDIRSSLEQLGLLKV*K 580
            VELS  VV VGESGDTDYEGLLGGVHKTVILKGI S++SN  HA R+YP+  VMP+DSPN+ QT   C   DI  +L ++G LK  K
Sbjct:  970 VELSNFVVFVGESGDTDYEGLLGGVHKTVILKGIGSNTSN-FHATRAYPMEHVMPVDSPNMFQT-GGCNIDDISDALSKIGCLKAQK 1054          
The following BLAST results are available for this feature:
BLAST of DN617924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
SPS1_CITUN2.679e-4097.65Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS_SOLTU1.686e-2660.71Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS_VICFA7.082e-2565.06Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS1_CRAPL3.515e-2460.00Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
SPS_BETVU3.886e-2363.75Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SPIOL8.657e-2364.37Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01N23_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617924 ID=DN617924; Name=DN617924; organism=Citrus sinensis; type=EST; length=580bp
GTGTAATAGTCTCATGTGGACAAAAGGCGTTTAGTTTACAATTTATACCA
AGTAACTCGTAATTATTTTCATCCAGATTTCATCTGCAAGTGATCTGGCT
CATTGACAAAATAAGGCCGATAGCAGCAACAAGACATCGAGTCTTTTGGG
GTTTCAGTGAATATACAAAATGGAAGAAAGAGATAAAAAATGAAGAGAAT
GCTTTGCATAACAAGGCCAACAGAGAAAGACCCAAATATGAACAATGTCA
GACAGACATGAGTAGATCTTAGATGAATTTAAACGAAAGGATAAGGAGGA
AGCGAGACAAGGCTGAAACCTTTCAGACCTTAAGAAGTCCTAATTGCTCC
AAAGAACTGCGGATATCAGAAGTTGTGCAATCTTCATGCGTCTGAACAAT
GTTGGGACTGTCAATTGGCATGACATCTGAGAGAGGGTAGCTTCGGTTAG
CATGGATTTGATTGCTTGAACTGCTGCAAATGCCCTTCAATATTACAGTT
TTGTGCACACCCCCAAGCAGTCCTTCGTAGTCCGTGTCCCCAGACTCCCC
AACAATAACCACCATCTTTGACAACTCCAC
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