DN617894

Overview
NameDN617894
Unique NameDN617894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length316
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11542 contig Csv1_Contig11542:156..471. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 1.988e-48
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDKTNNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   16 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.988e-48
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDKTNNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   16 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.554e-48
Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFIHIIPDK NNTL+IIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   16 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 116
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 1.289e-47
Identity = 96/101 (95.05%), Postives = 100/101 (99.01%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   17 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.289e-47
Identity = 96/101 (95.05%), Postives = 100/101 (99.01%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSGIGMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   17 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 1.683e-47
Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   17 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 1.683e-47
Identity = 95/101 (94.06%), Postives = 100/101 (99.01%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHI+PDK +NTLSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGADVS
Sbjct:   17 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVS 117
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 9.234e-46
Identity = 93/101 (92.08%), Postives = 97/101 (96.04%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLD QPELFI ++PDK+N TLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct:   16 LLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDGQPELFIRLVPDKSNKTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALQAGADVS 116
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.206e-45
Identity = 92/101 (91.09%), Postives = 97/101 (96.04%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVS 316
            +LSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKSKLDAQPELFI ++PDKTN TLSIIDSG+GM KADLVNNLGTIARSGTKEFMEAL AGADVS
Sbjct:   21 LLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSKLDAQPELFIRLVPDKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVS 121
[Close]
BLAST of DN617894 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.129e-42
Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 2 
Query:   14 VLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGA-DVS 316
            +LSLIINTFYSNKEIFLRELISN+SDALDKIRFESLTDKS ++AQPELFI ++PDK + TLSIIDSG+GMTK+DLVNNLGTIARSGTKEFMEALAAGA DVS
Sbjct:   26 LLSLIINTFYSNKEIFLRELISNASDALDKIRFESLTDKSNVNAQPELFIRLVPDKASKTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGATDVS 127
The following BLAST results are available for this feature:
BLAST of DN617894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HSP83_ARATH1.988e-4897.03Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH1.988e-4897.03Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP80_SOLLC7.554e-4896.04Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP81_ORYSJ1.289e-4795.05Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.289e-4795.05Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ1.683e-4794.06Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ1.683e-4794.06Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP81_ARATH9.234e-4692.08Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI1.206e-4591.09Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_MAIZE2.129e-4286.27Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01N08_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617894 ID=DN617894; Name=DN617894; organism=Citrus sinensis; type=EST; length=316bp
GAGATCAACCAGTGTGTTGAGTTTGATCATCAACACCTTTTACAGCAACA
AGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGAT
AAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAACC
AGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCTA
TTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCTT
GGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTGC
TGGGGCGGATGTGAGC
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