DN617869

Overview
NameDN617869
Unique NameDN617869
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5755 contig Csv1_Contig5755:499..1141. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.416e-21
Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = -3
Query:  381 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAAN-APQKKNFAQTPAVATDNWVLCRIFLK 638
            NR TG+G+WKATG D+ I +S GN+ +G+KK+LVFY+G+   G +TDW+MHE+RL + +  +P  K F  +P    D+W +CRIF K
Sbjct:   89 NRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKK 175          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 7.609e-21
Identity = 49/87 (56.32%), Postives = 56/87 (64.37%), Query Frame = -3
Query:  378 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 638
            NRA G GYWKATG DK +A     + VG+KK LVFY GK P G +TDWIMHEYRL  A  AP  K  +Q      D WVLCR++ KK
Sbjct:   94 NRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQ----KLDEWVLCRLYNKK 176          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.938e-21
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = -3
Query:  369 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGA 638
            NRA  SGYWKATG DK I +   N  VG+KK LVFY+G+PP G +TDWIMHEYRL  +  A  K+N     ++  D WVLCRI+ KKRGA
Sbjct:   82 NRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRN----GSMRLDEWVLCRIY-KKRGA 164          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.099e-19
Identity = 49/108 (45.37%), Postives = 63/108 (58.33%), Query Frame = -3
Query:  315 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSEDEETCTEIGGTRANG 638
            NRA GSGYWKATG DK + + +    V +KK LVFY GK P G +T+WIMHEYRL     + +KKN     ++  D+WVLCRI+ KK G +          G   + G
Sbjct:   82 NRAAGSGYWKATGADKPVGSPKP---VAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKN-----SLRLDDWVLCRIYNKKGGLEKPPAAAVAAAGMVSSGG 181          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.448e-19
Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = -3
Query:  378 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRL--VTAANAPQKKNFAQTPAVATDNWVLCRIFLKK 638
            NRA G+GYWKATG DK + + R    V +KK LVFY GKPP G +T+WIMHEYRL  V  + A +K + +   A+  D+WVLCRI+ KK
Sbjct:   82 NRAAGTGYWKATGADKPVGSPRA---VAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKK 167          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = -3
Query:  363 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKS 641
            +NRAT +GYWKATG DK++ +  G Q+VGMKKTLVFY+G+ P G +T W+MHEYRL         +N         + WV+CR+F K    K+
Sbjct:   94 TNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRL---------ENDHSHRHTCKEEWVICRVFNKTGDRKN 177          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.453e-19
Identity = 48/93 (51.61%), Postives = 62/93 (66.67%), Query Frame = -3
Query:  360 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSE 638
            NR  GSGYWKATG DK I+T    Q VG+KK LVFY GK P G++T+WIMHEYRL+     P ++N     +   D+WVLCRI+ K+  A+ +
Sbjct:   87 NRVAGSGYWKATGTDKIISTE--GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRN----GSTKLDDWVLCRIYKKQSSAQKQ 169          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.122e-19
Identity = 54/123 (43.90%), Postives = 69/123 (56.10%), Query Frame = -3
Query:  276 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSEDEETCTEIGGTRANGPKP--VFYDFMRKEE 638
            NR+ GSGYWKATG DK I   +    VG+KK LVFY GK P G +T+WIMHEYRL     + +KK      ++  D+WVLCRI+ KK              G T   GP P  V+ D + +E+
Sbjct:   80 NRSAGSGYWKATGADKPIGLPKP---VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKK----NSLRLDDWVLCRIYNKK--------------GATERRGPPPPVVYGDEIMEEK 181          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 47/93 (50.54%), Postives = 62/93 (66.67%), Query Frame = -3
Query:  360 NRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAVATDNWVLCRIFLKKRGAKSE 638
            NR  GSGYWKATG DK I+T    + VG+KK LVFY GK P G++T+WIMHEYRL+     P ++N     +   D+WVLCRI+ K+  A+ +
Sbjct:   87 NRVAGSGYWKATGTDKVISTE--GRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLI----EPSRRN----GSTKLDDWVLCRIYKKQTSAQKQ 169          
BLAST of DN617869 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.215e-18
Identity = 58/151 (38.41%), Postives = 83/151 (54.97%), Query Frame = -3
Query:  252 SNRATGSGYWKATGLDKQIATSRGNQIVGMKKTLVFYRGKPPHGSRTDWIMHEYRLVTAANAPQKKNFAQTPAV-----ATDNWVLCRIFLKKRGAKSEDEETCTEIGGTRANG----PKPV------------FYDFMRKEERADLNLVP 641
            +NRAT +G+WKATG DK I  S G +I GM+KTLVFY+G+ PHG ++DWIMHEYRL     +P+     +  ++       + WV+CRIF KK   K+ +    + +GG   +G    PK              F + M +  + +LNL P
Sbjct:   91 TNRATAAGFWKATGRDK-IIYSNGRRI-GMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLN----SPVGGASLSGGGDTPKTTSSQIFNEDTLDQFLELMGRSCKEELNLDP 235          
The following BLAST results are available for this feature:
BLAST of DN617869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC9_ARATH3.416e-2149.43Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC68_ORYSJ7.609e-2156.32NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC29_ARATH9.938e-2157.78NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC48_ORYSJ1.099e-1945.37NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC71_ORYSJ2.448e-1953.93NAC domain-containing protein 71 OS=Oryza sativa s... [more]
NAC31_ARATH5.453e-1947.31Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC19_ARATH5.453e-1951.61NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC2_ARATH7.122e-1943.90NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NAC55_ARATH1.215e-1850.54NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC43_ARATH1.215e-1838.41NAC domain-containing protein 43 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M19_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617869 ID=DN617869; Name=DN617869; organism=Citrus sinensis; type=EST; length=643bp
CCCCCTTTTTTGACTAAACGACCAAACATTAGATTACTTGATGATGATGG
ATAATTGGGTATTCTGATTTTTCTAATCAGAAACGCCAATTACTTGTACA
GAACACTAATTAAAAAGAGAGAAATTATTGAAAATGTTTACTGCTGTTTT
CTTCTAAAGTAAGGGAAGCTATTGCAACTACTCTCTTCATGATCGTCTGA
TTCATTTGAAGAAACTTCAGTGACTCCACTTGAGCCTGAGGAAGATGAAG
TTGGAACAAGGTTCAAGTCAGCCCTTTCCTCCTTTCTCATAAAATCATAA
AAAACCGGCTTGGGCCCGTTAGCCCTGGTTCCTCCAATTTCGGTGCACGT
TTCCTCATCCTCACTCTTGGCTCCTCTTTTCTTCAAAAAGATGCGGCATA
GAACCCAATTGTCCGTTGCCACAGCTGGGGTCTGGGCAAAGTTTTTCTTT
TGAGGGGCATTGGCAGCAGTAACAAGGCGGTATTCATGCATGATCCAATC
AGTCCTAGAGCCGTGTGGTGGCTTGCCTCTATAAAAAACGAGAGTTTTTT
TCATTCCCACGATTTGGTTGCCCCTGGAAGTCGCAATTTGCTTGTCAAGC
CCAGTTGCCTTCCAATAACCAGACCCCGTGGCCCTGTTCGATC
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