CX045823

Overview
NameCX045823
Unique NameCX045823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.314e-60
Identity = 90/118 (76.27%), Postives = 103/118 (87.29%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            D DF ELY FKWT+LLIPPTTVLI+N+VG+VAG+S AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWVR+DPF    TK     +CGINC
Sbjct:  910 DDDFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFVL-KTKGPDTSKCGINC 1026          

HSP 2 Score: 55.0694 bits (131), Expect = 2.314e-60
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = -3
Query:  723 ISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 830
            IS FAS++FI LF+SI  TGILE+RWSGV IE+ WR
Sbjct:  834 ISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWR 869          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.518e-59
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091          

HSP 2 Score: 63.1586 bits (152), Expect = 2.518e-59
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = -3
Query:  723 EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 833
            E++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR
Sbjct:  898 ELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWR 934          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.518e-59
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1091          

HSP 2 Score: 63.1586 bits (152), Expect = 2.518e-59
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = -3
Query:  723 EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 833
            E++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR
Sbjct:  898 ELTNIASLWFMSLFICIFATGILEMRWSGVGIDDWWR 934          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.283e-59
Identity = 88/122 (72.13%), Postives = 105/122 (86.07%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A ++G    +CG++C
Sbjct:  976 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNDGPLLEECGLDC 1092          

HSP 2 Score: 62.7734 bits (151), Expect = 3.283e-59
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = -3
Query:  723 EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 833
            E++N AS+WF+ LFI IFATGILE+RWSGVGI+D WR
Sbjct:  899 ELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWR 935          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.237e-58
Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNG----QCGINC 730
            D +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWVR+DPF      A +NG    +CG++C
Sbjct:  975 DEEFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL-----AKNNGPLLEECGLDC 1091          

HSP 2 Score: 58.9214 bits (141), Expect = 1.237e-58
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = -3
Query:  723 EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 833
            E++N AS+WF+ LFI IF TGILE+RWSGV I+D WR
Sbjct:  898 ELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWR 934          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.247e-56
Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            D +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV++DPF        +N     +C
Sbjct:  872 DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNSCANFDC 989          

HSP 2 Score: 56.225 bits (134), Expect = 3.247e-56
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = -3
Query:  723 ISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 830
            +SN A++WF+ LFISI  T +LE+RWSG+GIED WR
Sbjct:  796 LSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWR 831          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 3.247e-56
Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            D +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV++DPF        +N     +C
Sbjct:  872 DTEFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNSCANFDC 989          

HSP 2 Score: 56.225 bits (134), Expect = 3.247e-56
Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = -3
Query:  723 ISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 830
            +SN A++WF+ LFISI  T +LE+RWSG+GIED WR
Sbjct:  796 LSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWR 831          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.212e-56
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DGDFAELYVFKWTSLLIPPTTVL++NLVG+VAG+S+AINSGYQSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S   KA + GQCG+NC
Sbjct:  959 DGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 5.212e-56
Identity = 100/118 (84.75%), Postives = 111/118 (94.07%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DGDFAELYVFKWTSLLIPPTTVL++NLVG+VAG+S+AINSGYQSWGPLFGKLFF+IWVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV++DPF S   KA + GQCG+NC
Sbjct:  959 DGDFAELYVFKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGRQNRTPTIVIVWSILLASIFSLLWVKIDPFISPTQKAVALGQCGVNC 1076          
BLAST of CX045823 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.019e-54
Identity = 83/118 (70.34%), Postives = 102/118 (86.44%), Query Frame = -1
Query:  377 DGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRVDPFTSDDTKANSNGQCGINC 730
            DG+F+ELY+FKWTSLLIPPTT+LI+N+VG++ GVS AIN+GY SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWVRV+PF S D        CG++C
Sbjct:  971 DGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKDGPVLE--ICGLDC 1086          

HSP 2 Score: 50.8322 bits (120), Expect = 1.019e-54
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = -3
Query:  723 EISNFASMWFILLFISIFATGILEIRWSGVGIED*WR 833
            EISN+A + F+L+F+SI  TGILE++W  +GI+D WR
Sbjct:  894 EISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWR 930          
The following BLAST results are available for this feature:
BLAST of CX045823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CESA7_ARATH2.314e-6076.27Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA5_ORYSJ2.518e-5972.13Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI2.518e-5972.13Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA3_ORYSJ3.283e-5972.13Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA6_ORYSJ1.237e-5872.95Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA4_ORYSJ3.247e-5666.95Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI3.247e-5666.95Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA1_ORYSJ5.212e-5684.75Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI5.212e-5684.75Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA9_ARATH1.019e-5470.34Probable cellulose synthase A catalytic subunit 9 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_4C01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-4C01-E2-1-7.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX045823 ID=CX045823; Name=CX045823; organism=Citrus sinensis; type=EST; length=835bp
TTTTTTTTTTTTTTTTTGAGGATTACATTGTTTCTTAGCGCTCTGAACTT
GAGAAAATGGAGCTTCACAACTTAGGTCCAACACAACTAAACAAGTAGGG
ACCAACATCAAGCATCTGTATGGAAGTTACAAAACGATATAAGAATAAAT
ATTAAATAAGATACAAAAAGGGTTTTACTAAAGCCTCAAGTCCTCCTTAG
TAGGCTCCACGACAAATGAAAAGATCCCATATCATCAAACTCCTTTCTCC
AGACCGACGAGAAGTAAATTAACTTACGATCATTTCCCAATGACATAATT
TCTTCTTATATACACTGATGAGAGCTTGAAGGAAGAATGGCATTTGAAGC
CACAAATAATCATCCAACATGCACTAGCAATTGATGCCACATTGACCGTT
TGAATTGGCTTTGGTGTCATCAGAGGTAAAGGGATCAACACGCACCCACA
GCAAGGAGAAAATGGAAGCAAGTAGGATAGACCACACAATGACAATTGTT
GGTGTGCGGTTTTGACGACCCAACAGACCCTTCAGGAAAGGATACAGATG
GGCAATGACCCATATGGCAAAGAATAGCTTGCCAAAGAGTGGACCCCATG
ATTGGTAACCACTGTTTATGGCCCATGATACACCAGCTACAATACCCACC
AAGTTCACAATCAGGACTGTAGTTGGAGGGATGAGAAGAGATGTCCATTT
GAATACATAAAGCTCTGCAAAATCTCCATCAGTCCTCAATACCAACCCCA
CTCCATCTAATCTCCAGTATTCCAGTAGCAAAAATGGAAATGAAAAGTAG
AATAAACCACATGCTAGCAAAGTTGCTTATCTCTG
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