DN617841

Overview
NameDN617841
Unique NameDN617841
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length586
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2701 contig Csv1_Contig2701:1067..1651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_RENSM (Transaldolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=tal PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.368e-23
Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = -1
Query:  257 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANS 580
            GA  QR LWAST VK+PAYPDTLYV  L+ P+ V+TMP++ L A  DHG VS  TI     EA G+ +ALE LGI +N V   LE EG++ F  S+  LLD +Q+  NS
Sbjct:  258 GALPQRPLWASTGVKDPAYPDTLYVTELVAPNVVNTMPEKTLDATADHGVVSGNTISGRYDEANGVLNALEGLGISYNEVVALLEKEGLEKFVASWKELLDHVQDALNS 366          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_FRASN (Transaldolase OS=Frankia sp. (strain EAN1pec) GN=tal PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.158e-22
Identity = 56/109 (51.38%), Postives = 72/109 (66.06%), Query Frame = -1
Query:  257 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANS 580
            GAK QR LWASTS K+P  PDTLYV  LI P TV+TMP+  L+AF DHG V   TI  N  +A  + + L +LG+D   V   LE+EGV  F+ S++ LLDT++E+  S
Sbjct:  258 GAKPQRPLWASTSTKDPGLPDTLYVTELIAPGTVNTMPEATLEAFADHGVVPGDTITPNYEDARAVLAELTELGVDMADVVEVLEVEGVRKFEDSWNQLLDTIREQLGS 366          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_NEIMB (Transaldolase OS=Neisseria meningitidis serogroup B GN=tal PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.748e-22
Identity = 51/103 (49.51%), Postives = 69/103 (66.99%), Query Frame = -1
Query:  275 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 583
            KGA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+   V EA+   +    LGID   + T+L+ +G+  F+++F+ LL  L
Sbjct:  248 KGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLATRLQEDGLKQFEEAFEKLLAPL 350          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_FRAAA (Transaldolase OS=Frankia alni (strain ACN14a) GN=tal PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = -1
Query:  266 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEK 583
            KGAK QR LWASTS K+P+ PDT+YV+ LI P TV+TMP+  LQAF DHG V   TI  +  +A  +++AL  +G+D + V   LE +GV  F+ S++ LL T+ ++
Sbjct:  257 KGAKPQRPLWASTSTKDPSLPDTIYVSELIAPGTVNTMPEATLQAFADHGQVKGETIRPHYDDARQVFAALAAVGVDIDDVIETLETQGVQKFEDSWNQLLGTIAQQ 363          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_NEIMA (Transaldolase OS=Neisseria meningitidis serogroup A GN=tal PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = -1
Query:  275 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 583
            +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+     EA+   + +  LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  248 QGANRVQLLWASTGVKNPAYPDTLYVDSLIGAHTVNTVPDATLKAFIDHGTAKATLTEGADEAQAQLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 350          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_NEIM0 (Transaldolase OS=Neisseria meningitidis serogroup C (strain 053442) GN=tal PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.300e-21
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = -1
Query:  275 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 583
            +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+   V EA+   +    LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  248 QGANRVQLLWASTGVKNPAYPDTLYVDNLIGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLANRLQEDGLKQFEEAFEKLLAPL 350          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_TRIEI (Transaldolase OS=Trichodesmium erythraeum (strain IMS101) GN=tal PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.084e-20
Identity = 51/112 (45.54%), Postives = 72/112 (64.29%), Query Frame = -1
Query:  254 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALE--KLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQEKANSL 583
            KGAK+QRLLWASTS KNPAY D +YV  LIGP+TV+T+P   + A  DH  V   ++ N+   + +   L+   + I+ + V  QL +EG+D F K F SL+++L+EK   L
Sbjct:  266 KGAKEQRLLWASTSTKNPAYSDVMYVDELIGPNTVNTLPPPTIDACADHCDVDNRVETNIEVTKEVMENLKDPDININIDQVMEQLLVEGIDKFIKPFTSLINSLEEKVKKL 377          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_FRASC (Transaldolase OS=Frankia sp. (strain CcI3) GN=tal PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.084e-20
Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = -1
Query:  275 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 580
            GAK QR LWASTS K+P+ PDT+YV  LI P TV+TMP+  L+AF DHG+V+  TI     EA  +++ L  +GID + V   LE +GV  F+ S+  LLDT+
Sbjct:  258 GAKPQRPLWASTSTKDPSLPDTIYVTELIAPGTVNTMPEATLEAFADHGSVTGETIRPRYEEAHEVFAQLTAVGIDLDDVIETLESQGVQKFEDSWTQLLDTI 360          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_NEIG1 (Transaldolase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=tal PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.416e-20
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = -1
Query:  275 KGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTL 583
            +GA + +LLWAST VKNPAYPDTLYV  LIG  TV+T+PD  L+AF+DHG    T+  +  EA    + +  LGID   +  +L+ +G+  F+++F+ LL  L
Sbjct:  248 QGANRVQLLWASTGVKNPAYPDTLYVDSLIGVHTVNTVPDATLKAFIDHGTAKATLTESADEARARLAEIAALGIDVETLAARLQEDGLKQFEEAFEKLLAPL 350          
BLAST of DN617841 vs. ExPASy Swiss-Prot
Match: TAL_THISH (Transaldolase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=tal PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.849e-20
Identity = 51/104 (49.04%), Postives = 66/104 (63.46%), Query Frame = -1
Query:  269 GAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVSRTIDLNVSEAEGIYSALEKLGIDWNYVGTQLELEGVDSFKKSFDSLLDTLQE 580
            GA  QRLLWAST  KNP Y D LYV  LIG  TV+T+P    +AF+DHG+V+ T+   V  A    +AL  LGID   +  +LE EG+++F+K+F  LL  L E
Sbjct:  264 GAHPQRLLWASTGTKNPDYSDVLYVDSLIGEHTVNTLPPATYRAFLDHGSVAETLAEGVETARAQVAALADLGIDLESITDRLESEGIEAFQKAFRHLLGVLAE 367          
The following BLAST results are available for this feature:
BLAST of DN617841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TAL_RENSM1.368e-2353.21Transaldolase OS=Renibacterium salmoninarum (strai... [more]
TAL_FRASN1.158e-2251.38Transaldolase OS=Frankia sp. (strain EAN1pec) GN=t... [more]
TAL_NEIMB5.748e-2249.51Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL_FRAAA2.853e-2148.60Transaldolase OS=Frankia alni (strain ACN14a) GN=t... [more]
TAL_NEIMA8.300e-2146.60Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL_NEIM08.300e-2147.57Transaldolase OS=Neisseria meningitidis serogroup ... [more]
TAL_TRIEI1.084e-2045.54Transaldolase OS=Trichodesmium erythraeum (strain ... [more]
TAL_FRASC1.084e-2050.49Transaldolase OS=Frankia sp. (strain CcI3) GN=tal ... [more]
TAL_NEIG11.416e-2046.60Transaldolase OS=Neisseria gonorrhoeae (strain ATC... [more]
TAL_THISH1.849e-2049.04Transaldolase OS=Thioalkalivibrio sp. (strain HL-E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01M05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001M05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617841 ID=DN617841; Name=DN617841; organism=Citrus sinensis; type=EST; length=586bp
TTTTTTTTTTTTTTTTCGGCACTAAAACACTTATCATACATAATAATTAT
TGTCATACAGATTATGAGAAGTGGATTGAAAACCCACTAGATTTATTTCA
GTCACAAGGGAAAATAAGAGTCCGTTTGGGGCAGCTGCGCTGCATTCTTG
GTGAAAATTTCTCCAAAAACATAGGTGAGGGCACAGCGCAGCTGCCCCAA
GTGGGTTTTAAGCAAAAAAAAAAACCAATTACAGTTTACAGACTAACCAG
CTTGAGAGAGTTTGCCTTCTCTTGCAGGGTATCCAGCAGACTATCAAAGC
TCTTCTTGAAAGAATCTACCCCTTCAAGTTCGAGTTGAGTGCCAACGTAG
TTCCAATCAATTCCCAACTTCTCCAGTGCACTGTAAATGCCTTCAGCTTC
AGAAACATTCAAGTCAATTGTTCTTGAAACTGCACCATGATCAACAAATG
CTTGGAGAGCTTGGTCTGGCATGGTTGAAACCGTATCAGGTCCAATGAGA
GGAGCAACATATAGAGTGTCAGGGTAGGCAGGATTCTTTACACTGGTTGA
GGCCCACAGAAGTCTCTGCTTCTTTGCACCTTTCTT
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