DN617806

Overview
NameDN617806
Unique NameDN617806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK4_RAT (Uncharacterized aarF domain-containing protein kinase 4 OS=Rattus norvegicus GN=Adck4 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.283e-37
Identity = 72/147 (48.98%), Postives = 96/147 (65.31%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            FLYD ++  + L+DFGA+RA+   F D Y+ +V A A+GDR+  ++ S+ L FLTG E     DAHV+A  I+G PFA  G YDF A    + I  L   +LRHRL PPP+E Y+LHRKL+GAFLAC ++ A + CR+L  D Y  Y
Sbjct:  369 FLYDASSHKVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEAVMILGEPFAASGSYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 515          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK4_MOUSE (Uncharacterized aarF domain-containing protein kinase 4 OS=Mus musculus GN=Adck4 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.011e-37
Identity = 72/147 (48.98%), Postives = 96/147 (65.31%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            FLYD ++  + L+DFGA+RA+   F D Y+ +V A A+GDR+  ++ S+ L FLTG E     DAHV+A  I+G PFA  G YDF A    + I  L   +LRHRL PPP+E Y+LHRKL+GAFLAC ++ A + CR+L  D Y  Y
Sbjct:  374 FLYDASSHQVTLLDFGASRAFGTEFTDHYIEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEAVMILGEPFAASGPYDFGAGETARRIQGLIPVLLRHRLRPPPEETYALHRKLAGAFLACARLHAHIACRDLFQDTYHRY 520          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK4_HUMAN (Uncharacterized aarF domain-containing protein kinase 4 OS=Homo sapiens GN=ADCK4 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.007e-36
Identity = 72/154 (46.75%), Postives = 97/154 (62.99%), Query Frame = -2
Query:  152 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEESD 613
            FLYD ++  + L+DFGA+R +   F D Y+ +V A A+GDR+  ++ SR L FLTG E     DAHV+A  I+G PFA  G YDF +    + I +L   +LRHRL PPP+E Y+LHRKL+GAFLAC  + A + CR+L  D Y  Y    + D
Sbjct:  373 FLYDASSHQVTLLDFGASREFGTEFTDHYIEVVKAAADGDRDCVLQKSRDLKFLTGFETKAFSDAHVEAVMILGEPFATQGPYDFGSGETARRIQDLIPVLLRHRLCPPPEETYALHRKLAGAFLACAHLRAHIACRDLFQDTYHRYWASRQPD 526          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: COQ8_CAEEL (Ubiquinone biosynthesis protein coq-8 OS=Caenorhabditis elegans GN=coq-8 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.346e-32
Identity = 67/141 (47.52%), Postives = 92/141 (65.25%), Query Frame = -2
Query:  158 LIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEE 580
            L+DFGA+RAY K FVD Y+ ++ +  +GD++  IE SR +GFLTG E  +M DAHV++  I+G   A    Y+F   ++T  I  L   ML HRLT PP+E YSLHRKLSG +L   K+ A V C  L  +++E+Y FGE+
Sbjct:  608 LLDFGASRAYGKKFVDIYMNIIKSAYDGDKKKIIEYSREIGFLTGYETSVMEDAHVESVMIMGETLASNHPYNFANQDVTMRIQKLIPVMLEHRLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEIHENYVFGED 748          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK3_DANRE (Chaperone activity of bc1 complex-like, mitochondrial OS=Danio rerio GN=cabc1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.683e-32
Identity = 64/152 (42.11%), Postives = 95/152 (62.50%), Query Frame = -2
Query:  158 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHYQFGEE 613
            F YD  T  + L+DFGA R + +SF D Y+ ++ A A+G+RE  ++ S  + FLTG E+  M++AHV A  I+G  FA    +DF A + T+ I NL   ML+ RL PPP+E YSLHRK+ G+FL C ++ A + C+++    Y +Y  G +
Sbjct:  446 FFYDPQTHRVALLDFGATRGFDESFTDVYIEIIKAAADGNREGVLKQSIDMKFLTGYESKAMVNAHVDAVMILGEAFASEEPFDFGAQSTTERIHNLIPVMLKQRLIPPPEETYSLHRKMGGSFLICSRLNAKISCKDMFEAAYSNYWSGRK 597          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK3_RAT (Chaperone activity of bc1 complex-like, mitochondrial OS=Rattus norvegicus GN=Cabc1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.489e-31
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            F YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S  + FLTG E   M DAH+ A  I+G  FA    +DF   + T+ I NL   ML+HRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  495 FFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPIMLKHRLIPPPEETYSLHRKMGGSFLICSKLKACFPCKAMFEEAYSNY 641          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK3_HUMAN (Chaperone activity of bc1 complex-like, mitochondrial OS=Homo sapiens GN=CABC1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.489e-31
Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            F YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+    S  + FLTG E  +M DAH+ A  I+G  FA    +DF   + T+ I NL   MLRHRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  494 FFYDPQQHKVALLDFGATREYDRSFTDLYIQIIRAAADRDRETVRAKSIEMKFLTGYEVKVMEDAHLDAILILGEAFASDEPFDFGTQSTTEKIHNLIPVMLRHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK3_BOVIN (Chaperone activity of bc1 complex-like, mitochondrial OS=Bos taurus GN=CABC1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.489e-31
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            F YD     + L+DFGA R + +SF D Y++++ A AN DRE+ ++ S  + FLTG E   M DAH+ A  I+G  FA    +DF   + T+ I NL   ML+HRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  494 FFYDPELHKVALLDFGATREFDRSFTDLYIQIIRAAANQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPIMLKHRLVPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 640          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ADCK3_MOUSE (Chaperone activity of bc1 complex-like, mitochondrial OS=Mus musculus GN=Cabc1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.944e-31
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFAKPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            F YD     + L+DFGA R Y +SF D Y++++ A A+ DRE+ ++ S  + FLTG E   M DAH+ A  I+G  FA    +DF   + T+ I NL   ML+HRL PPP+E YSLHRK+ G+FL C K+ A  PC+ +  + Y +Y
Sbjct:  491 FFYDPQQHKVALLDFGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQSTTEKIHNLIPVMLKHRLIPPPEETYSLHRKMGGSFLICSKLKARFPCKAMFEEAYSNY 637          
BLAST of DN617806 vs. ExPASy Swiss-Prot
Match: ABCI_SCHPO (Protein ABC1 homolog, mitochondrial OS=Schizosaccharomyces pombe GN=abc1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.067e-29
Identity = 66/149 (44.30%), Postives = 92/149 (61.74%), Query Frame = -2
Query:  173 FLYDEATKTINLIDFGAARAYPKSFVDEYLRMVVACANGDRESAIEMSRRLGFLTGMENVIMLDAHVQAAFIVGMPFA--KPGGYDFCANNITQSISNLGATMLRHRLTPPPDEAYSLHRKLSGAFLACIKIGAVVPCRELLLDVYEHY 613
            FLY+  TK I L+DFGA+  Y + F+ +Y R+++A A+ +RE   ++S  LG+L   E+  M+DAH+ + F +  PFA   P  YDF    IT  +      ML  RL PPP+E YSLHR+LSG FL C K+GA V C+EL   + +HY
Sbjct:  460 FLYNGKTKKIELLDFGASIEYDEKFIKKYCRLLLAAAHRNREKCKKLSVELGYLNNHESAQMIDAHINSIFTLAEPFAFDAPDVYDFGDQTITARVKQQIPVMLDLRLQPPPEETYSLHRRLSGHFLLCAKLGAKVRCKELFSGMLKHY 608          
The following BLAST results are available for this feature:
BLAST of DN617806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ADCK4_RAT5.283e-3748.98Uncharacterized aarF domain-containing protein kin... [more]
ADCK4_MOUSE9.011e-3748.98Uncharacterized aarF domain-containing protein kin... [more]
ADCK4_HUMAN2.007e-3646.75Uncharacterized aarF domain-containing protein kin... [more]
COQ8_CAEEL1.346e-3247.52Ubiquinone biosynthesis protein coq-8 OS=Caenorhab... [more]
ADCK3_DANRE6.683e-3242.11Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_RAT1.489e-3144.22Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_HUMAN1.489e-3144.90Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_BOVIN1.489e-3144.22Chaperone activity of bc1 complex-like, mitochondr... [more]
ADCK3_MOUSE1.944e-3144.22Chaperone activity of bc1 complex-like, mitochondr... [more]
ABCI_SCHPO1.067e-2944.30Protein ABC1 homolog, mitochondrial OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01L11_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617806 ID=DN617806; Name=DN617806; organism=Citrus sinensis; type=EST; length=614bp
TTTTTTTTTTTTTTTTGGGATTAAACAATTTCATACAATAATAGGGATGG
ATAATTGCATCCCAAACTTATTGCACGTGTACGAATCAATCAAAATTTTG
GAAACAAAACTGATTAGACTATGACGATATTGAGCCACTTGACAAGAACT
CATCACTCTCTTCACCGAACTGATAATGCTCGTATACATCTAGTAGTAAT
TCCCTACATGGGACAACTGCCCCGATCTTGATACAAGCTAAGAAAGCACC
AGAAAGCTTCCGATGAAGACTATAAGCCTCATCAGGGGGTGGTGTAAGCC
TGTGCCTAAGCATCGTTGCCCCAAGGTTTGAAATGCTTTGGGTTATATTG
TTGGCACAGAAGTCATAGCCACCTGGTTTTGCAAATGGCATTCCCACTAT
AAATGCAGCCTGAACATGAGCATCTAACATTATCACATTTTCCATTCCAG
TAAGGAACCCTAGTCTTCGAGACATCTCAATCGCTGATTCTCTGTCACCA
TTTGCACATGCAACAACCATTCTCAAATACTCATCAACGAAGCTTTTAGG
GTATGCCCGAGCTGCTCCAAAGTCGATGAGATTGATTGTTTTTGTAGCCT
CATCATATAAGAAG
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