DN617804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.349e-49 Identity = 89/136 (65.44%), Postives = 115/136 (84.56%), Query Frame = -1 Query: 179 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 586 GKL E+T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE +DL++V+GG+NSSNT+HLQEI+ +R IPSY IDS RIGPGN++ +K +H L KENWLP+G I +GITSGASTPDK V DVL+K+F +K Sbjct: 262 GKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.316e-48 Identity = 85/137 (62.04%), Postives = 119/137 (86.86%), Query Frame = -1 Query: 176 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 586 GKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VEDV++++F+++R Sbjct: 261 GKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.316e-48 Identity = 85/137 (62.04%), Postives = 119/137 (86.86%), Query Frame = -1 Query: 176 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 586 GKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L E WLP G +TIGITSGASTPDK VEDV++++F+++R Sbjct: 261 GKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 8.249e-48 Identity = 85/140 (60.71%), Postives = 115/140 (82.14%), Query Frame = -1 Query: 167 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 586 GKL E+T+MRK+G VNEHF+SFNTICDATQERQDA++++V+E +DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS RIGPGN++ +K ++ +L +NWLP G + IG+TSGASTPDK V D+++K+F IK A Sbjct: 270 GKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 5.347e-47 Identity = 88/136 (64.71%), Postives = 111/136 (81.62%), Query Frame = -1 Query: 179 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 586 GKL E+TM++K+G + +NEHF+SFNTICDATQERQDAM +V+E +DL++V+GG+NSSNT+HLQEIA + GIPSY IDS RIGPGN+I +K +H ENWLP ITIGITSGASTPDK VE+VL K+F ++ Sbjct: 261 GKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKVVEEVLNKIFALR 396
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.191e-46 Identity = 87/141 (61.70%), Postives = 115/141 (81.56%), Query Frame = -1 Query: 164 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 586 GKL E TM++K+G +NEHF+SFNTICDATQERQDAM +VEE+VD+++V+GG+NSSNT+HLQEI+ ++GI SY IDS+KRI PGNKI +K + ++ KENWLP G+I +G+TSGASTPDK VE V++++FE K L Sbjct: 261 GKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 8.537e-45 Identity = 84/139 (60.43%), Postives = 111/139 (79.86%), Query Frame = -1 Query: 170 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREE 586 GKL EKT+++K+G +N HF+SFNTICDATQERQDAM+ +VEE + L++V+GG+NSSNT+HLQEIA + GIPS IDS RIGPGN++ +K + +L E WLP G+IT+G+TSGASTPDK VE+V+KK+ IK + Sbjct: 234 GKLFEKTLLQKYGPIELNNHFMSFNTICDATQERQDAMFDLVEEDLSLMVVIGGFNSSNTTHLQEIAVEHGIPSVHIDSGDRIGPGNRVEHKPLGKDLEVLEPWLPAGKITVGVTSGASTPDKVVEEVMKKILAIKEAQ 372
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.456e-44 Identity = 82/141 (58.16%), Postives = 114/141 (80.85%), Query Frame = -1 Query: 164 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 586 GKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VEDV++K+F +K A+ Sbjct: 261 GKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP2 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ispH PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.902e-44 Identity = 84/140 (60.00%), Postives = 111/140 (79.29%), Query Frame = -1 Query: 167 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 586 GKL E+TM+ KFG +N+HF+SFNTICDATQERQDAM+ +VE+ +DL++V+GG+NSSNT+HLQEIA +R IPSY IDS R+ N IA+K + GE+ + +WLP G++ IG+TSGASTPDK VEDV+ K+F K + A Sbjct: 261 GKLFEQTMLEKFGPTEINDHFMSFNTICDATQERQDAMFDLVEKDLDLMVVIGGFNSSNTTHLQEIAVERNIPSYHIDSGDRLLGNNVIAHKPLDGEITTQTHWLPAGKLKIGVTSGASTPDKVVEDVIAKIFAEKAQPA 400
BLAST of DN617804 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.902e-44 Identity = 82/141 (58.16%), Postives = 114/141 (80.85%), Query Frame = -1 Query: 164 GKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 586 GKL E TM++K+G +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID +RI N I ++ ++GELV ENWLP G+I +G+TSGASTPDK VEDV++K+F +K A+ Sbjct: 261 GKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401 The following BLAST results are available for this feature:
BLAST of DN617804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617804 ID=DN617804; Name=DN617804; organism=Citrus sinensis; type=EST; length=595bpback to top |